Chromosome II Linkage data


Map of chromosome II.... II contigs and cloned genes
References.... Gene lists.... Other maps and data.... Maps home page

Mitotic map

a. Mitotic recombination, acrA selective marker; references 537
b. Mitotic recombination, acrA, acrB selective markers; reference 332
c. Mitotic recombination, wA, ygA selective markers; reference 165
d. Mitotic recombination leading to duplication loss in duplication strain. The results suggest an alternative order for thiA and acrB. Reference 135
e. Mitotic recombination in wild type and homozygous T1(II;VIII) strains, acrA, cnxE selective markers; reference 54

Meiotic map data

First markers are ordered from conventional left to right along each chromosome. Note that the ranking of markers not mapped to close neighbours may be quite speculative. The second marker is one determined to be to the right of the first marker (except where the map distance is given in square brackets [ ]: see below). Second markers are listed in order of increasing recombination value from the first marker, with the exception of unorientated linkages, which are placed first.

Where the map distance is given in square brackets [ ] the orientation of the linkage has not been determined.
"50%" linkage implies that markers were meiotically unlinked, but orientation has been determined by linkage to other markers.
">50%" implies that markers were meiotically unlinked, but orientation has been ascertained by mitotic recombination.
Linkage given as "?" indicates marker position ascertained relative to neighbouring markers, but distance not estimated.

Meiotically unmapped markers located on II only by haploidisation or hybridisation
actD,E, aloA, amrA, asuA,B, bguA, blA, camB, fpaS, gamA, glcK, hetH, hisG, (hypD?), imaE, mkkA, nimG,R, nihB, nsdA, pcaA,C, D, phrB, rhiB, sepG,J, sfdB, suAveA, sudC, tgsA, trpD, tutB.

a map distance likely to be distorted by heterozygosity for chromosome aberration.
v recombination estimate affected by viability disturbance.

Marker 1
% Recombination ± standard error or (Number of progeny analysed)
Marker 2
Reference
cysD,E
[50]
cysB, adH, acrA, palcA, riboE, puA, cnxE, adD, acrB,

cysB102
36.6 ± 2.8
adH23
194
T1(II,VII)-musP234
18a
adH23
344,343
npeD
6 (194)
iodA
414
npeD
41 (194)
acrA
414
adH23
13.8 ± 1.07
fpaQ
662
adH23
30.0 ± 4.0
acrA1
332
adH23
38.6 (618)
acrA1
42
snxA
32
acrA
805
snxA
43
wA
805
iodA1
25
acrA1
702
iodA
36 (<500)
acrA
338
fpaQ
20.6 ± 1.64
acrA
662
acrA1
[17.3] (127)
tebB
965
acrA
7
etbA
586
acrA1
9.4 (618)
apnA1
42
acrA
20.8
methA
258
acrA1
24.8 ± 0.8
wA
332
acrA1
35
tsA25
252
acrA1
47.4
riboE6
556
etbA
17
wA
586
apnA1
17.5 (618)
wA3
42
methA
3.9
wA
258
wA
[34] (504)
saA
360
wA3
1.3
methA17
42
wA
21.4 (471)
phoA
814
wA
23.6 (512)
phoA1
814
wA
19
palcA
216
wA
18 (tetrads)
CEN
640
wA
22
tsA25
252
wA
31.5
riboE6
556
wA3
35 (>1000)
sbrA1
417
wA
44.9 ± 0.8
thiA4
332
methA17
20.4 (186)
palcA1
42
phoA
8.1 (471)
palcA
814
palcA1
<9
CEN
54
palcA1
9
drkB5
54
palcA1
18
riboE6
216
palcA77
18.5 ± 1.06
fpaP1
662
CEN
<9
T1(II;VIII)-nis5
54
CEN
<9
drkB5
54
T1(II;VIII)-nis5
<9
drkB5
54
drkB5
1
gatB200
54
drkB5
6.6 (1035)
sbrA1
417
drkB5
10
creC27
54
gatB200
6
riboE6
54
riboE6
7.6 ± 0.5
fpaP77
662
riboE6
13
creC27
54
riboE6
16.1 (305)
creD34
62
creD34
3.3 (305)
creC27
62
creC27
1 (305)
glnA2
62
creC27
21
pdeB2
54
glnA2
30.4 (305)
pdeB2
62
pdeA1
28
amdR (intA-101)
54
amdR (intA-101)
44
gmdA1
54
amdR
adjacent (physical)
hapC
487
gmdA1
?
inoA1
54
gmdA1
14
thiA4
54
inoA1
?
thiA4
54
thiA4
25
anB8
54
thiA4
33.5 ± 1.2
puA2
332
senA1
16
anB8
54
anB8
0.7
mauB4
54
mauB4
<1
T1(II,VIII)-nis5
54
mauB4
0.4
puA2
54
T1(II,VIII)-nis5
<1
puA
54
puA2
0.7
ileA1
54
puA
5.9
ileAab1
556
puA
19.2 ± 1.2
cnxE (ni3)
332
puA
> 50
lacB3
556
imaC10
3.2
ileA (ab1)
678
imaC10
14.5
cnxE16
678
ileA1
0.1
ssuA1
54
ileA (ab1)
11.8
cnxE(ni3)
556
ileA (ab1)
12.1 ± 2.1
cnxE16
678
ssuA1
12
cnxE16
54
cnxE(ni3)
18
tsC17
252
cnxE
20
mauC
483
cnxE(ni3)
25
rB50
218
cnxE16
27 (>200)
hurA1
299
cnxE(ni3)
28.0v (385)
adD3
620
cnxE(ni3)
30.6 ± 1.3
adCD
332
cnxE16
30.5 ± 4.5
aauC1,2
366
cnxE(ni3)
31.4v (385)
trpA (fpE48)
620
cnxE16
33
ygA6
54
cnxE
38 (608)
musQ
344, 343
cnxE14
39.3 (89)
punA11
633
tsC17
15 (>200)
hurA1
299
tsC17
21.5
adD3
252
trpA69
[4] (>200)
hurA1
299
trpA69
[4.1] ± 1.4
punA1
634
trpAfpE48
26.7v (385)
adC1
620
punA11
16.8 ± 3.9
ygA6
633
aauC1,2
23.7 ± 4.1
ygA6
366
musQ230
15 (469)
adC1
344, 343
musQ230
35 (240)
acrB2
344, 343
adC1
0.3 (703)
adD3
536
adD3
0.08
ygA
170
adD
adjacent cosmids
acoB
865
adD3
2.4 ± 0.5
benB29
678
adD3
2.5 ± 0.5
acrB2
678
adD3
29.2 ± 1.6
acrB2
332
adD3
23.7
lacB3
556
ygA
1.8 (553)
acoB
132
ygA
3.5 (553)
benB
132
acoB
1.8 (553)
benB29
132
acoB
same BAC
atrC
865
benB29
[0.5] ± 0.3
acrB2
678
benB2
26
creB15
865
atrC
same BAC
creB
865
acrB2
[3]
creB15
83
Map of chromosome II.... II contigs and cloned genes
References.... Gene lists.... Other maps and data.... Maps home page