Genes in Contigs: Chromosome III

Column 2 shows contigs ordered by chromosome arm. The orientations of previously unattached contigs are shown relative to the supercontigs in which they are now incorporated, for details see Revised supercontig list, telomere locations. In columns 4 and 5, genes named in publications or GenBank entries are listed according to the position of the most closely corresponding autocalled gene.

Genes represented on the linkage map are shown in bold.

Genomic data from The Broad Institute (http://www.broad.mit.edu/annotation/fungi/aspergillus/)
Telomere positions from Li, W., Rehmeyer, C.J., Staben, C. & Farman, M.L. (ref 1088).

Links:
Chromosome III linkage map.... Linkage data for chromosome III
Other maps and data.... Gene lists.... References.... Maps home page

Chromosome	Contig	Supercontig	Gene/ element	Autocalled gene (or position)
IIIL	-	5	Telomere T11	-
IIIL	86	5	spoC-C1D	AN5086.3
IIIL	86	5	spoC-C1C	AN10628.3
IIIL	85	5	-	-
IIIL	84	5	mdhB	AN5031.3
IIIL	84	5	ppoC	AN5028.3
IIIL	84	5	tsaA	AN5021.3
IIIL	84	5	arfB	AN5020.3
IIIL	84	5	gapA	AN4998.3
IIIL	84	5	aurA	AN4991.3
IIIL	84	5	pkaR	AN4987.3
IIIL	84	5	tbpA	AN4976.3
IIIL	84	5	galE	AN4957.3
IIIL	84	5	ntf2	AN4942.3
IIIL	84	5	nudR	AN4917.3
IIIL	84	5	gstA	AN4905.3
IIIL	84	5	meaB	AN4900.3
IIIL	84	5	smsA	AN4893.3
IIIL	84	5	pdcA	AN4888.3
IIIL	84	5	ubi1	AN4872.3
IIIL	84	5	chiB	AN4871.3
IIIL	84	5	ran-GAP	AN4862.3
IIIL	84	5	pmaA	AN4859.3
IIIL	233 +	5	-	-
IIIL	83	5	palI	AN4853.3
IIIL	83	5	agdG	AN4843.3
IIIL	83	5	cnxH	AN4841.3
IIIL	82	5	-	-
IIIL	183 -	5	panK	AN9446.3
IIIL	81	5	fluG	AN4819.3
IIIL	81	5	hk-8-4	AN4818.3
IIIL	81	5	gtaA	AN4809.3
IIIL	81	5	aspE	AN10595.3
IIIL	81	5	rrpB	AN4790.3
IIIL	81	5	uvsI	AN4789.3
IIIL	81	5	sluA	AN4788.4
IIIL	81	5	rpl37	AN4787.3
IIIL	81	5	csnB	AN4783.3
IIIL	201 -	5	-	-
IIIL	80	5	sA	AN4770.3
IIIL	80	5	sC	AN4769.3
IIIL	80	5	atrE	AN4749.3
IIIL	80	5	racA	AN4743.3
IIIL	80	5	ciaA	AN4740.3
IIIL	80	5	adI	AN4739.3
IIIL	80	5	matA-2	AN4734.3
IIIL	80	5	pkaB	AN4717.3
IIIL	80	5	hexA	AN4695.3
IIIL	80	5	arbD	AN4691.3
IIIL	80	5	mccA	AN4690.3
IIIL	80	5	ivdA	AN4688.3
IIIL	80	5	mccB	AN4687.3
IIIL	80	5	csnA	AN4686.3
IIIL	80	5	rfeG	AN4680.3
IIIL	80	5	mpkC	AN4668.3
IIIL	80	5	aspA	AN4667.3
IIIL	79	5	ivoC	AN10573.3
IIIL	79	5	ivoA	AN10576.3
IIIL	79	5	alX	AN4603.3
IIIL	79	5	nup42	AN4595.3
IIIL	238 +	5	-	-
IIIL	78	5	usgA	AN4578.3
IIIL	78	5	fmdS	AN4577.3
IIIL	78	5	chsC	AN4566.3
IIIL	78	5	teaA	AN4564.3
IIIL	78	5	phnB	AN4561.3
IIIL	78	5	nkuB	AN4552.3
IIIL	78	5	PRP8	AN4523.3
IIIL	78	5	fhpA	AN4521.3
IIIL	78	5	kipB	AN4513.3
IIIL	78	5	amyC	AN4507.3
IIIL	78	5	artA	AN4501.3
IIIL	78	5	nsp1	AN4499.3
IIIL	78	5	rpdA	AN4493.3
IIIL	78	5	leuB	AN4486.3
IIIL	78	5	amcC	AN4481.3
IIIL	78	5	hk4	AN4479.3
IIIL	179 -	5	ste24	AN11231.3
IIIL	77	5	cypB	AN4467.3
IIIL	77	5	pycA?	AN4462.3
IIIL	77	5	hk5	AN4447.3
IIIL	77	5	metH	AN4443.3
IIIL	77	5	recQ	AN4432.3
IIIL	76	5	argB	AN4409.3
IIIL	76	5	radC	AN4407.3
IIIL	76	5	ubcN	AN4399.3
IIIL	76	5	sepH	AN4385.3
IIIL	76	5	rsnA	AN4380.3
IIIL	76	5	gdhA	AN4376.3
IIIL	76	5	pectinase	AN4372.3
IIIL	75	5	metR	AN4361.3
IIIL	75	5	palA	AN4351.3
IIIL	75	5	barA	AN4332.3
IIIL	74	5	-	-
IIIL	73	5	-	-
IIIL	72	5	nup133	AN4293.3
III	-	Centromere	-
IIIR	163	13	ptkA	AN8865.3
IIIR	163	13	eRF1	AN8853.3
IIIR	163	13	phenA	AN11135.3
IIIR	163	13	swoC	AN8851.3
IIIR	163	13	gmtA	AN8848.3
IIIR	163	13	phnC	AN8847.3
IIIR	163	13	mid1	AN8842.3
IIIR	163	13	ampB	AN8831.3
IIIR	163	13	halA	AN8830.3
IIIR	162	13	cmkC	AN8827.3
IIIR	162	13	cnaA	AN8820.3
IIIR	198 +	13	-	-
IIIR	161	13	rodA	AN8803.3
IIIR	161	13	sgdC	AN8800.3
IIIR	161	13	carC	AN8793.3
IIIR	161	13	kapM	AN8787.4
IIIR	161	13	bimB	AN8783.3
IIIR	161	13	suaB (gln-tRNA)	(145869-145954)
IIIR	161	13	amdS	AN8777.3
IIIR	161	13	ornC?	AN8770.3
IIIR	161	13	mclA	AN8755.3
IIIR	161	13	asnA	AN8754.3
IIIR	214 -	13	nimA	AN9504.3
IIIR	160	13	mstA	AN8737.3
IIIR	160	13	glkA	AN8689.3
IIIR	160	13	ptaC	AN8686.3 (= AN8685.3)
IIIR	159	13	ptaC	AN8685.3 ( = AN8686.3)
IIIR	159	13	mcmA	AN8676.3
IIIR	209 -	13	furD (start)	AN11247.3
IIIR	158	13	furD (end)	AN11247.3
IIIR	158	13	areA	AN8667.3
IIIR	158	13	catA	AN8637.3
IIIR	158	13	umtA	AN8616.3
IIIR	158	13	Laccase	AN8581.3
IIIR	-	13	Telomere T16

Chromosome III linkage map.... Linkage data for chromosome III
Other maps and data.... Gene lists.... References.... Maps home page