Genes in Contigs: Chromosome IV

Column 2 shows contigs, ordered by chromosome arm. The orientations of previously unattached contigs are shown relative to the supercontigs in which they are now incorporated; for details see Revised supercontig list, telomere locations. In columns 4 and 5, genes named in publications or GenBank entries are listed according to the position of the most closely corresponding autocalled gene.

Genes represented on the linkage map are shown in bold.

Genomic data from The Broad Institute (http://www.broad.mit.edu/annotation/fungi/aspergillus/)
Telomere positions from Li, W., Rehmeyer, C.J., Staben, C. & Farman, M.L. (ref 1088).

Links:
Chromosome IV linkage map.... Linkage data for chromosome IV
Other maps and data.... Gene lists.... References.... Maps home page


Chromosome
Contig
Supercontig
Gene/element
Autocalled gene
(or position)

IVL
-
9
Telomere T2
-
IVL
128
9
glaB
AN7402.3
IVL
128
9
laccase
AN7389.3
IVL
128
9
cpeA
AN7388.3
IVL
128
9
p5cr
AN7387.3
IVL
128
9
mutA
AN7349.3
IVL
128
9
agdC
AN7345.3
IVL
127
9
uvsH
AN7309.3
IVL
127
9
bimD
AN7296.3
IVL
127
9
acuL
AN7287.3
IVL
126
9
-
-
IVL
125
9
-
-
IVL
124
9
nhA1
AN7250.3
IVL
205 -
9
amdX
AN9492.3
IVL
123
9
-
-
IVL
223 +
9
-
-
IVL
122
9
odeA
AN7204.3
IVL
121
9
-
-
IVL
120
9
-
-
IVL
119
9
breB
AN7123.3
IVL
119
9
foxA
AN7111.3
IVL
119
9
cshA
AN7103.3
IVL
119
9
mstD
AN10891.4
IVL
118
9
-
-
IVL
211 +
9
-
-
IVL
117
9
metG
AN7051.3
IVL
117
9
farA
AN7050.3
IVL
117
9
lipA
AN7046.3
IVL
117
9
pptB
AN7043.3
IVL
117
9
chsA
AN7032.3
IVL
117
9
bemA
AN7030.3
IVL
117
9
hosB
AN7019.3
IVL
117
9
mdrA
AN7007.3
IVL
117
9
uvsB
AN6975.3
IV

Centromere

IVR
129
10
hisHF
AN7430.3
IVR
129
10
ODC antizyme
AN7432.3
IVR
129
10
pdiA
AN7436.3
IVR
129
10
gdhB
AN7451.3
IVR
129
10
frA
AN7459.3
IVR
129
10
meaA
AN7463.3
IVR
129
10
acuK
AN7468.3
IVR
129
10
mirC
AN7485.3
IVR
129
10
modA
AN7487.3
IVR
129
10
agdD
AN7505.3
IVR
129
10
napA
AN7513.3
IVR
129
10
flbB
AN7542.3
IVR
129
10
hapB
AN7545.3
IVR
129
10
devR
AN7553.3
IVR
129
10
palC
AN7560.3
IVR
129
10
tubB
AN7570.3
IVR
129
10
srrB
AN7572.3
IVR
129
10
atrF
AN10949.3
IVR
129
10
bzuA
AN10950.3
IVR
130
10
rpmA
AN7609.3
IVR
130
10
xlnR
AN7610.3
IVR
130
10
calA
AN7619.3
IVR
130
10
inoB
AN7625.3
IVR
130
10
binA
AN7635.3
IVR
130
10
TIM9
AN7649.3
IVR
130
10
gelA
AN7657.3
IVR
130
10
freA
AN7662.3
IVR
130
10
enaC
AN10982.3
IVR
130
10
snfA
AN7695.3
IVR
130
10
sskA
AN7697.3
IVR
130
10
shoA
AN7698.3
IVR
131
10
ornA
AN7722.3
IVR
131
10
pyroA
AN7725.3
IVR
131
10
kapN
AN7731.4
IVR
131
10
penR2
AN7734.3
IVR
131
10
aglD
AN7735.3
IVR
132
10
preA
AN7743.3
IVR
132
10
ergA
AN11008.3
IVR
132
10
nkuA
AN7753.3
IVR
132
10
apsA
AN7757.3
IVR
132
10
lysophospholipase A
AN7792.3
IVR
132
10
gprK
AN7795.3
IVR
132
10
mirA
AN7800.3
IVR
132
10
estA?
AN7801.3
IVR
132
10
stcW
AN7804.3
IVR
132
10
stcV
AN7805.3
IVR
132
10
stcU
AN7806.3
IVR
132
10
stcT
AN7807.3
IVR
132
10
stcS
AN7808.3
IVR
132
10
stcQ
AN7810.3
IVR
132
10
stcP?
(199519-20080)
IVR
132
10
stcO
AN7811.3
IVR
132
10
stcN?
AN7812.3
IVR
132
10
stcL
AN11013.3
IVR
132
10
stcK
AN7814.3
IVR
132
10
stcJ
AN7815.3
IVR
132
10
stcI
AN7816.3
IVR
132
10
stcF
AN7818.3
IVR
132
10
aflR
AN7820.3
IVR
132
10
stcE
AN7821.3
IVR
132
10
stcC
AN7823.3
IVR
132
10
stcB
AN7824.3
IVR
132
10
stcA
AN7825.3
IVR
133
10
-
-
IVR
-
10
Telomere T13
-
Chromosome IV linkage map.... Linkage data for chromosome IV
Other maps and data.... Gene lists.... References.... Maps home page