Aspergillus nidulans gene loci: A

Gene symbols given in parenthesis after the standard one are alternatives or obsolete.
Symbols of extranuclear genes are given in square brackets.
Linkage groups in parenthesis () have been determined by haploidization, but the marker has not been located meiotically. {} indicates location by hybridisation or BLAST searching.
Autocalled gene numbers in curly brackets {} indicate identification only by homology and map position/synteny.

KEY
def.= deficiency; inhib.= inhibited; regl.= regulation; req.= requiring; res.= resistant; sup.= suppressor; upt.= uptake; ut.= utilization; deH = dehydrogenase
# = mutant strains available from Glasgow or Fungal Genetics Stock Centre

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Gene
Linkage gp.
Phenotype, enzymes etc.
References
GenBank
/(Ok) EST
Closest
autocalled
gene
aaX #
(VI)
Allantoic acid ut. allantoicase
736, 412, 590
 
{AN3104.3}
aatA (acyA, npeA, penDE)
VI
Isopenicillin acyltransferase, peroxisomal
394, 440
X53310, M58293
AN2623.3
aatB
{I}
Isopenicillin acyltransferase
1218

AN6775.3
aauA
(VII)
Glutamate & aspartate upt.
504
 
 
aauB (=shrA?)
VII
Amino acid upt.
366
 
 
aauC
II
Amino acid upt.
366
 
 
aauD
VIII
Amino acid upt.
366
 
 
aau-102
?
Amino acid upt.
883
 
 
abaA(aba)#
VIII
"abacus" aconidial
158, 166, 438
J04850
AN0422.3
abcA
?
Multidrug resistance: ABC transporter
213
 
 
abcB
?
Multidrug resistance: ABC transporter
213
 
 
abcC
?
Multidrug resistance: ABC transporter
213
 
 
abcD (atrD)
(VIII) {VII}
Multidrug resistance: ABC transporter
213
AF173826 AF071411, BD102843, BD102844
AN2300.3
abfB
{VII}
Alpha-L-arabinofuranosidase
809
AF13759 Y13759
AN1571.3
abpA
{VII}
abp1 homologue, endocytic internalization.
1136
EF107589
AN11147.3
accA
{I}
Acetyl-CoA carboxylase
443
Y15996
AN6126.3
acdA

Putative fatty acyl-CoA dehydrogenase
1130
 
 
acdB

Putative fatty acyl-CoA dehydrogenase
1130
 
 
acl
-
Acleistothecial
718
 
 
aciA
I
Formate dehydrogenase
70, 571
Z11612
AN6525.3
acnA (actA)
I
Gamma actin
242, 913, 1188
M22869
AN6542.3
acnA

Actinin
1129


aco
-
Aconidial
78
 
 
acoA
{V}
Aconitase
913
AF515630
AN5525.3
acoA
VII
Aconidial
132, 94
 
 
acoB (csnG)
II
Aconidial, COP9 signalosome complex subunit 7
132, 148, 1158
U18265
AN3623.3
acoC
VII
Aconidial
132, 645
 
 
acoD(fluG)
(III)
Aconidial
714
L27817
AN4819.3
acoT
?
Aconidial
78
 
 
acpA
{V}
Acetate permease
1182
EF428327
AN5226.4
acrA(Acr1)#
II
Acriflavine
568
 
 
(acrA)
 
see also tsaA and pcrA
 
 
 
acrB(acr2)#
II
Acriflavine res., component of CreB regulatory network, protein ubiquitination
568, 979
AF485329
AN3597.3
acrC,D
?
Acriflavine res.
652
 
 
actA (=imaG?)#
III
Actidione (cycloheximide) res.
678, 702
 
 
actA (acnA)
I
Actin
1188
 
AN6542.3
actB#
VII
Actidione (cycloheximide) res.
678
 
 
actC(=imaH)
III
Actidione (cycloheximide) res.
678
 
 
actD
(II)
Actidione (cycloheximide) res.
678
 
 
actE
(II)
Actidione (cycloheximide) res.
678
 
 
acuA,B,C see facA,B,C
 
 
 
 
 
acuD (icl, cetE) #
V
Acetate ut. isocitrate lyase
24, 256, 400
X62696
AN5634.3
acuE (mas) #
I
Acetate ut. malate synthase
20, 24, 582, 584
X56671
AN6653.3
acuF # (cetI?)
(VII)
Acetate ut. PEP carboxykinase
24, 1170
AY049067
AN1918.3
acuG #
V
Acetate ut. fructose-1,6-diphosphatase
24, 1169
AF525021
AN5604.3
acuH #
(V)
Acetate ut., carnitine/acyl carnitine carrier
24
AJ011563
AN5356.3
acuJ #
I
Acetate ut., mitochondrial carnitine acetyltransferase
24, 812, 1106
 
AN6279.3
acuK #
IV
Acetate ut., C6 regulation, zinc binuclear cluster protein
24, 400, 1169
 
AN7468.3
acuL #
IV
Acetate ut., possible homologue of ACR1 - succinate-fumarate transporter
24
 
{AN7287.3}
10109-11306
acuM #
I
Acetate ut., malic enzyme regulation, zinc binuclear cluster protein
24, 400, 1169
AF256961
AY256961
AN6293.3
acuN #
V
Acetate ut., enolase
24, 1169
 
AN5746.3
acuO
(V)
Acetate ut.
598
 
 
acvA (npeA,pcbAB
VI
Aminoadipyl cysteinyl valine synthetase
394, 396, 440
X54853, AH000059, S40247, S40212
AN2621.3
acyA (aatA, npeA, penDE)
VI
Isopenicillin acyltransferase
394, 440
X53310, M58293
AN2623.3
adA #
I
Adenine req., adenylosuccinate lyase
244
 
{AN6209.3}
adB (oxpA) #
VIII
Adenine req., adenylosuccinate synthetase, oxallopurine res.
244, 587
AF123461
AN0893.3
adC = adD (ad1)#



 
 
adD (ad3) #
II
adenine req., phosphoribosylaminoimidazole carboxylase
244, 262, 536
 
AN3626.3
adE (ad8) #
I
Adenine req., amidophosphoribosyl transferase
332, 540, 466
 
{AN10837.3}
adF (ad9) #
I
Adenine req., phosphoribosylamine-glycine ligase
144, 332, 658
 
{AN6541.3}
adG (ad14) #
I
Adenine req., phosphoribosylglycinamide formyltransferase
332
 
{AN10753.3}
adH (ad23) #
II
Adenine req., phosphribosylformylglycinamide synthase
332
 
{AN8121.3}
adI (ad50) #
III
Adenine req., N-succinyl-5-aminoimidazole-4-carboxamide ribotide synthetase
222
 
{AN4739.3}
adaB
{I}
S. cerevisiae Ada2p homologue; histone acetylation
1191
 
AN10763.3
adh3, (alcC)
{VII}
Alcohol dehydrogenase III
922
X02764
AN2286.3
adpA (arfB)
{III}
ADP-ribosylation factor
 
AY187628
AN5020.3
afeA
{VIII}
Adenylate-forming enzyme
 
AY254381
AN0054.3
aflR
IV
Sterigmatocystin biosynthesis regulation, zinc binuclear cluster transcription factor
125
U34740
AN7820.3
agaA
VI
Arginase
82, 96, 121
U62482
AN2901.3
agdA
{VII}
alpha-glucosidase A, isomaltose + AmyR-induced
904, 1143
AF208225
AN2017.3
agdB
{VII}
alpha-glucosidase B, isomaltose + AmyR-induced
886
AB057788
AN8953.3
agdC
{IV}
alpha-glucosidase, CreA-repressed
1143

AN7345.3
agdD
{IV}
alpha-glucosidase
1143

AN7505.3
agdE
{VIII}
alpha-glucosidase, AmyR + isomaltose-induced
1143

AN0941.3
agdF
{II}
alpha-glucosidase, AmyR + isomaltose-induced
1143

AN10420.3
agdG
{III}
alpha-glucosidase
1143

AN4843.3
agsA
{I}
alpha-1,3 glucan synthase
1154

AN5885.3
agsB
{VI}
alpha-1,3 glucan synthase
1154

AN3307.3
agtA
{I}
dicarboxylic amino acid transporter

EU604104
AN6118.3
ahbA (= nimX)
{II}
Anucleate, unbranched hyphae, never in mitosis
1020, 481
U07169
AN4182.3
ahbB
{V}
Abnormal (excessive) hyphal branching
1020
AY363053
AN10647.3
ahpA #
VII
hoxA homologue
 
AY532908
AN2020.3
ahrA #
VIII
Aspartic hydroxamate res., asparaginase
228
 
{AN0139.3}
aifA
{VI}
Apoptosis-inducing factor
1212
 
AN9103
aif-1,2
?
Intermediate filaments. See also rgsC
439
 
 
akeP
{VII}
Possible extracellular esterase, ketone-induced
240, 596, 1064
AF496548
AN8977.3
alP
?
Allantoin non-ut., allantoin permease
736, 590
 
 
alX #
III
Allantoin non-ut., allantoinase
200, 588, 590
 
{AN4603.3}
alcROAMSU
VII
Alcohol dehydrogenase cluster
854
 
 
alcA
VII
Ethanol non-ut., alcohol deH I
388, 484
M16196
S47331
DQ076245
AN8979.3
alcB
{II}
Alcohol deH II
301, 602
Z48000
AN3741.3
alcC (adh3)
VII
Alcohol deH III
328, 330
X02764
{AN2286.3}
alcD
VII
Alcohol deH II regl.
596
 
 
alcE
(IV)
Alcohol deH II regl.
596
 
 
alcM
VII
AlcR regulated gene
854
DQ076245
AN8980.3
alcP see akeP)



 
 
alcR
VII
Ethanol ut. regl., zinc binuclear cluster transcription factor
240, 388, 602
M24071 AF496548
AN8978.3
alcS
VII
AlcR regulated non-essential membrane protein
854, 1147
DQ076245
AN8981.3
aldA
VIII
Ethanol ut. aldehyde deH
602, 484, 518, 388
M16197, AF260123
AN0554.3
algC
{VIII}
Protein glycosylation, Dol-P-Man:Man5GlNac2-PP-Dol manosyltransferase
1178

AN0104.3
aloA
(II)
Allosuppressor, enhancer of suaC
425
 
 
aloB
(III)
Allosuppressor, enhancer of suaD
514
 
 
aloC
(IV)
Allosuppressor, enhancer of suaC
425
 
 
aloD
(V)
Allosuppressor, enhancer of suaC
425
 
 
aloE
(VI)
Allosuppressor, enhancer of suaC
425
 
 
alpA
{V}
alp14, Dis1/TOG homologue; hyphal directionality
1151
 
AN5521.3
alxA (aod-1)
{VII}
Alternative oxidase, mitochondrial
 
AB039832 AY140654
AN2099.3
"AMA1"
IV
Autonomous plasmid Maintenance in Aspergillus. DNA fragment
934
X78051
(Contigs 121-122)
amaA
?
Ammonium ut. (with gdhA)
372
 
 
amcA (amc1)
{VII}
Homology to mitochondrial carrier protein
823, 837
AY027563, AF146189
U71603
AN8881.3
amcA

Monocarboxylate transporter
1068


amcB
{VIII}
Monocarboxylate transporter
1068

AN9333.3
amcC
{III}
Monocarboxylate transporter
1068

AN4481.3
amdA #
VII
Acetamidase regl.
40, 308, 496, 387
L28810
AN2270.3
(amdI)
III
Acetamidase regl.: promoter region of amdS
184, 308, 496
M16371
AN8777.3
amdR (=intA)
II
Acrylamide non-ut. acetamidase regl., zinc binuclear cluster transcription factor
6, 310, 312, 496
M31517
AN4035.3
amdS
III
Amide non-utilization. acetamidase
184, 310, 312
M16371
AN8777.3
amdT see areA
 
 
 
 
 
amdX
IV
Acetamidase regl. zinc-finger DNA-binding protein
453
U56100
AN9492.3
ammE
(see amrA)
 
 
 
 
 
ampA
VII
rvs167 homologue, endocytic internalization.
1136

AN2516.3
ampB
III
rvs161 homologue, endocytic internalization.
1136

AN8831.3
amrA (ammE)
(II)
Ammonium derepressed
506, 496
 
 
amrB
(see tamA)
 
 
 
 
 
amr1
{VIII}
Multi-drug resistance
 
AY547350
AN0732.3
amyA
{VII}
Alpha amylase, AmyR + isomaltose-induced
1143
AF208225
AN2018.3
amyB
{VI}
Alpha amylase, AmyR + isomaltose-induced
1143
AF208224
AN3402.3
amyC
{III}
Alpha amylase
1143

AN4507.3
amyD
{VI}
Alpha amylase, CreA-repressed
1143

AN3308.3
amyE
{I}
Alpha amylase
1143

AN6324.3
amyF
{VI}
Alpha amylase, AmyR + isomaltose-induced, CreA-repressed
1143

AN3388.3
amyG
{VI}
Alpha amylase, CreA-repressed
1143

AN3309.3
amyR (malA)
VII
Amylase regulator, cys-6 zinc finger protein, maltose utilization
841
AF208225, AB024615
AN2016.3
anA (an1) #
I
Aneurine req. {phosphomethylpyrimidine kinase}
332
 
{AN10762.3}
anB (an2) #
II
Aneurine req.
246
 
 
anbH1 (penR)
{IV}
Penicillin gene repressor
884
Y17331
AN7734.3
aniA
?
Arginase repression
98, 100
 
 
ankA (sntA)
{I}
Cell cycle checkpoint, suppressor of nimT, wee1 homologue, ser/thr protein kinase
735, 804
U25693
AN5822.3
AnRP (RP)
?
Xylanase regulator
968
 
 
"ans1"
I
Transformation enhancing DNA fragment
933
Y00493
-

antA
{VIII}
ATP transporter, S. cerevisiae ANT1 homologue
1051
 
AN0257.3
anthA-D
?
Anthranillate req.
460
 
 
anuA (v10)
VII
Multinucleate conidia and hyphal compartments
211
 
 
aod-1 (= alxA)
{VII}
Alternative oxidase, mitochondrial
 
AY140654 AB039832
AN2099.3
aoxA

Putative fatty acyl-CoA oxidase
1130
 
 
aoxB

Putative fatty acyl-CoA oxidase
1130
 
 
apA
(VIII)
Aminopterin res.
12
 
 
apdA
{V}
Aspyridone biosynthesis, PKS-NRPS
1149
 
AN8412.3
apdB
{V}
Aspyridone biosynthesis, cytochrome P450 monooxygenase
1149
 
AN8408.3
apdC
{V}
Aspyridone biosynthesis, enoyl reductase
1149
 
AN8409.3
apdD
{V}
Aspyridone biosynthesis, FAD-dependent monooxygenase
1149
 
AN8410.3
apdE
{V}
Aspyridone biosynthesis, cytochrome P450 monooxygenase
1149
 
AN8411.3
apdF
{V}
Aspyridone biosynthesis, monocarboxylate exporter
1149
 
AN8413.3
apdR
{V}
Aspyridone biosynthesis, C6 regulator
1149
 
AN8414.3
apdG
{V}
Aspyridone biosynthesis, acyl-CoA dehydrogenase
1149
 
AN8415.3
aplA (allp)
(VI)
Allopurinol res., xanthine deH regl.
292, 588, 590
 
 
apnA #
II
Asparagine ut. asparaginase II
42
 
 
apsA
IV
Anucleate primary sterigmata. Coiled-coil protein
166, 243
X82289
AN7757.3
apsB
VI
Anucleate primary sterigmata. Coiled-coil protein
166, 647
AJ003163
AN3437.3
apyA
{VI}
Arrestin-PY domain protein, protein ubiquitination
1002
AY460113
AN3265.3
ar
-
Actidione res.
694, 696
 
 
araA (galB?)#
VIII
L-arabinose ut., L-arabitol dehydrogenase
159, 168
 
{AN0942.3}
arbD
{III}
Arabinitol dehydrogenase homology
1005
AY387591 AY434691
AN4691.3
arcA (suGpro)
{VIII}
Arginine catabolism regl. Zn2cys6 protein
96, 100, 843
AJ294750
AN0202.3
arcs
-
Actidione res., cold sensitivity
694, 696
 
 
areA (amdT, xprD)
III
Ammonium repression, GATA zinc finger transcription factor
138, 496, 590, 40, 36, 64
X52491, X90649
AN8667.3
areB
I
Ammonium repression
52, 64, 666
AF320976
AN6221.3
arecA = uvsC
 
 
 
 
 
arfA
{VIII}
ADP-ribosylation factors, vesicle trafficking, SCArf1p and SCArf2p homologue
1122, 1129
 
AN1126.3
arfB (adpA)
{III}
ADP-ribosylation factor, vesicle trafficking, SCArf3p homologue, endocytosis, hyphal polarity
1127, 1129
AY187628
AN5020.3
argA (arg1) #
VI
Arginine req., arginosuccinate lyase
90, 536, 192
 
{AN2914.3}
argB #
III
Arginine req., OTCase
112, 192, 246, 536
M29819
AN4409.3
argC #
VII
Arginine req., AS synthetase
192, 246, 536
 
{AN1883.3}
arlA
{I}
Arginine req., AS synthetase
1129
 
AN5912.3
aromA (arom)
VIII
Aromatic metabolite req., multifunctional protein
150, 560
X05204
AN0708.3
aromB
(V)
Aromatic metabolite req.
560
 
 
aroC(aromC)#
I
Aromatic metabolite req. chorismate mutase
560, 373
AF133241
AN6866.3
aroF
{V}
3-deoxy-D-arbino-heptulosonate-7-phosphate synthase alpha subunit
860
AF283008
AN5701.3
aroG
{VIII}
3-deoxy-D-arbino-heptulosonate-7-phosphate synthase beta subunit
860
AF283009
AN0354.3
arpA
VII
Altered ribosomal profile
696
 
 
arpB
VIII
Altered ribosomal profile
696
 
 
arpC
(VIII)
Altered ribosomal profile
696
 
 
arp11
{VI}
Actin-related protein, dynactin complex, Arp11 homologue; nuclear distribution
1204
 
AN3185.3
artA
{III}
Aspergillus Rad Twentyfour homologue, 14-3-3 protein
902
AF348497
AN4501.3
as
-
Actidione ultrasensitivity
694, 696
 
 
asgA
?
GTPase (EST), Septation Initiation Network
891
 
 
asmA see csmA
 
 
 
 
 
asnA
(III)
Asparagine req., asparagine synthetase
372
 
{AN8754.3}
aspA
{III}
Septin, cdc11 homolgue, hyphal structure
441
AF299320
AN4667.3
aspB
I
Septin, cdc3 homologue, hyphal structure
435, 441
U83489
AN6688.3
aspC
{II)
Septin, cdc12 homologue
441
AF299321
AN8182.3
aspD
{VIII}
Septin, cdc10 homologue
441
AF299322
AN1394.3
aspE
{III}
Septin
441
AF299323
AN10595.3
aspnd1
{VII}
Antigen. membrane protein, zinc regulated
145
Z50175, Z80229
AN1832.3
astA
{VI}
Pseudogene corresponding to alternative sulphate permease in other A. nidulans strains
1119
DQ219420, DQ189223
AN10387.3
asuA #
(II)
Antisuppressor of suaC
424
 
 
asuB #
(II)
Antisuppressor of suaC
424
 
 
asuC #
(I)
Antisuppressor of suaC
424
 
 
asuD #
(V)
Antisuppressor of suaC
424
 
 
asuE #
?
Antisuppressor of suaC
424
 
 
asuM
VI
Antisuppressor of methionine suppressor
721
 
 
ataA
{I}
Acyltransferase homology
 
AF141864
AN6139.3
atfA
{VI}
Atf-1-related bZIP transcription factor
 
AY166595
AN2911.3
atgA
{V}
Autophaogosome formation, S. cerevisiae ATG8 homologue
1212

AN1531.3
atmA
{VIII}
DNA damage response. human ATM homologue, phosphatidyl-3-kinase related protein kinase, hyphal polarity
1100

AN0038.3
atrA
(W6-096)
{VII}
Multidrug resistance, ABC transporter
752
Z68904
AN8928.3
atrB
(W6-096)
{V}
Multidrug resistance, ABC transporter
752
Z68905
AN8489.3
atrC
{VII}
ABC transporter
801
AF071410 BD102856, BD102857
AN2349.3
atrC
II
ABC transporter, cycloheximide resistance
948
AF082072
AN3608.3
atrD (abcD)
(VIII) {VII}
Multidrug resistance, ABC transporter
801
AF071411, BD102843, BD102844 AF173826
AN2300.3
atrE
{III}
Multidrug resistance, ABC transporter
17
AJ309280 AJ276241
AN4749.3
atrF
{IV}
Multidrug resistance, ABC transporter
17
AJ309281
AN10949.3
atrG
{VIII}
Multidrug resistance, ABC transporter
17
AJ309282
AN0771.3
atrH
{VIII}
ABC transporter
882
AY484468
AN0404.4
aurA
{II}
Aureobasidin res., inositol phosphorylceramide synthase
813
AF076691
AN4991.3
avaA
{VIII}
Vacuolar biogenesis, GTPase, Vam4 (yeast) and Rab7 (human) homology
903
AB072431
AN0089.3
avaB (hbrB)
{I}
Vacuolar biogenesis, Vam6/Vpa39-like protein, hyphal polarity
1007, 983
AB090888 AY522343
AN10849.3
azgA
{V}
8-Azaguanine res., purine transporter
736, 590, 1004
AJ575188
AN8534.3
azgB
?
8-Azaguanine res., purine upt.
652
 
 

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