See alphabetical locus lists for gene details
| Function
|
Genes
|
| Acetamide
utilization
|
amdA,I,R-T,X
|
| Acetate
biosynthesis
|
pdhA-C
|
| Acetate
utilization
|
facA-C,
acuD-M, idpA
|
| Acetylglucosamine
biosynthesis
|
orlA,B
|
| Acrylamide
utilization
|
amdA,I,R-T,X
|
| Adenine
biosynthesis
|
adA-I,
suA-CadE20
|
| Adenine
utilization
|
nadA
|
| Alcohol
utilization
|
alcA-E,
aldA, idpA
|
| Allantoic
acid utilization
|
aaX,
alP,X
|
| Allopurinol
resistance
|
aplA
|
| Amide
utilization
|
amdA,I,R-T,X
|
| Aminovaleric
acid utilization
|
davA
|
| Ammonium
assimilation
|
amaA,
gltA
|
| Ammonium
repression
|
amrA,
areA,B, meaA,B, modAmeaA, nmrA, tamA
|
| Ammonium
sensitivity
|
gdhA
|
| Aneurine
biosynthesis
|
anA,B,
thiA
|
| Anthranilic
acid biosynthesis
|
anthA-D,
nicA,B
|
| Arabinose
utilization,
|
araA
|
| Arginine
catabolism
|
agaA,
aniA, arcA, otaA
|
| Arginine
biosynthesis
|
argA-D,
cpaA, ornA-D
|
| Aromatic
amino acid catabolism
|
fahA,
fpdA, hmgA, maiA, qutA-R
|
| Aromatic
metabolite biosynthesis
|
aroA-G
|
| Arylsulphatase
regulation
|
sul-regA-E
|
| Asparagine
catabolism
|
ahrA,
apnA,
|
| Asparagine
biosynthesis
|
asnA
|
| Aspyridone
biosynthesis
|
apdA-G
|
| Benzamide
utilization
|
bzuA,
gmdA
|
| Benzoate
utilization
|
bguA
|
| Biotin
biosynthesis
|
biA
|
| Cellulose
degradation
|
cbhA,B,
eglA,B
|
| Chitin
biosynthesis
|
gcnA,
gfaA, orlA,B, tsE
|
| Chlorate
resistance
|
cnxA-J,
crnA, niaD, nirA
|
| Chlorogenic
acid utilization
|
cutA(?)
|
| Choline
biosynthesis
|
choA-C
|
| Choline-O-sulphate
utilization
|
csuA
|
| Citric
acid cycle
|
citA
|
| Coenzyme
A biosynthesis
|
panK
|
| Cysteine
biosynthesis
|
cysA-E,
mecA-C
|
| Diazonium
colour conversion
|
rA-E
|
| Emericellamide
biosynthesis
|
easA-D
|
| Ethanol
utilization
|
alcA-E,R,
aldA, idpA
|
| Extracellular
proteases
|
xprA-G
|
| Fatty
acid biosynthesis
|
accA,
odeA, ufaA, fasA,B, noxA
|
| Fluoroacetate
resistance
|
facA-C,
fanA-E
|
| Fluorophenylalanine
resistance
|
fpaA-V
|
| Folate
biosynthesis
|
folA,B,C
|
| Formamide
utilization
|
fmdS
|
| Fructose
utilization
|
frA
|
| GABA
utilization
|
gatA,B,
ssuA
|
| Galactose
utilization
|
galA-H,
gamA-C
|
| Galacturonate
utilization
|
gaaA,B
|
| Glucan
biosynthesis
|
fksA,
orlC,D
|
| Glucosamine
biosynthesis
|
gcnA,
tsE
|
| Glucuronate
utilization
|
glrA-G
|
| Glutamate
biosynthesis
|
pycA,B
|
| Glutamate
utilization
|
aauA,
gdhA-C
|
| Glutamine
biosynthesis
|
glnA
|
| Glutamine
hydrolysis
|
gtaA
|
| Glycerol
utilization
|
glcA-L
|
| Glycine
utilization
|
tgsA,
tguA-C
|
| Glycolysis
|
gpdA,
pdcA, pgkA?, pkiA
|
| Glycosylation
|
gcnA,
msdA,B,C, pmtA
|
| Haem
biosynthesis
|
hemA
|
| Histidine
biosynthesis
|
hisA-J
|
| Histidine
utilization
|
sarA,B
|
| Hypoxanthine
utilization
|
cnxA-J,
hxA,B
|
| Indole
biosynthesis
|
indA
|
| Inositol
biosynthesis
|
inoA,B
|
| Iron
metabolism
|
amcA,
atrH, estA, freA, mirA-C, sreA, sidA-C, sodA
|
| Isocitrate
lyase regulation
|
iclA,B
|
| Isoleucine
biosynthesis
|
ileA
|
| Lactam
utilization
|
lamA,B,
amdR
|
| Lactose
utilization
|
bgaA-C,
lacA-I
|
| Leucine
catabolism
|
hlyA,
ivdA, mccA,B
|
| Leucine
biosynthesis
|
luA
|
| Light
sensitivity
|
fluG,
veA, suA-DveA, pyroA
|
| Lineoleic
acid biosynthesis
|
odeA
|
| Lysine
biosynthesis
|
lysA-F
|
| Malonate
catabolism
|
sgdD
|
| Maltose
utilization
|
malA
|
| Mannose
utilization
|
manA,
mnrA
|
| Methionine
biosynthesis
|
methA-H,
metR, suAmeth, supA
|
| Molybdoprotein
biosynthesis
|
cnxA-J
|
| Monoamine
utilization
|
mauA-C
|
| Nicotinic
acid biosynthesis
|
nicA-C
|
| Nitrate
utilization
|
cnxA-J,
crnA, niaD, niiA, nirA
|
| Nitrite
sensitivity
|
nihA,
ninA
|
| Nitrite
utilization
|
niiA,C,
nirA
|
| Ornithine
biosynthesis
|
ornA-D
|
| Osmoregulation
|
gfdA,
gldA, hogA, mkkA, msnA, orlA, pbsA, pmA, ptpA, shoA, skoA, slnA, sskA, steB,
treA,B
|
| p-aminobenzoic
acid biosynthesis
|
pabaA,B,
suApabaB
|
| Pantothenate
biosynthesis
|
pantoA-C
|
| Pectate/pectin
metabilism
|
pelA,
sipA
|
| Penicillin
biosynthesis
|
acvA,
acyA, ipnA, npeA-E, penA-D,R, pkaC, pkcA, prgA,B
|
| Pentose-phosphate
pathway
|
pppA,B
|
| pH
regulation
|
pacC,
palA-C, E,F,H,I, phrA-D, suDpalA1, suA,BpalB7, suXpalC4, suCpalF15
|
| Phenylacetate
catabolism
|
phacA,B
|
| Phenylalanine
catabolism
|
fahA,
fpdA, hmgA, maiA
|
| Phenylalanine
biosynthesis
|
phenA,B
|
| Phosphatases,
acid
|
palcA-C,
pacA,G
|
| Phosphatases,
alkaline
|
palcA-C,
palD,G
|
| Photosensitivity
|
fluG,
veA, suA-DveA, pyroA
|
| Piperidine
utilization
|
pdeA,B
|
| Proline
biosynthesis
|
p5cr,
proA,B, suA-Lpro
|
| Proline
utilization
|
prnA-D
|
| Propionate
utilization
|
mcsA
|
| Proteolysis
|
prtA,B,
xprA-G, ubi1, ubi4
|
| Protocatechuate
utilization
|
pcaA-G,
qutH
|
| Purine
catabolism
|
aaX,
alP,X, aplA, areA, azgA, cnxA-J, hxA,B, hxnR,S, uaX-Z, uapA-C, ureA-E
|
| Putrescine
biosynthesis
|
puA
|
| Putrescine
utilization
|
punA,B
|
| Pyridone
biosynthesis
|
apdA-G
|
| Pyridoxine
biosynthesis
|
pyroA,B
|
| Pyrimidine
biosynthesis
|
pyrA-G,N
|
| Quinate
utilization
|
bguA,
qutA-H,R
|
| Riboflavin
biosynthesis
|
riboA-G
|
| Secondary
metabolism regulation
|
pkaC
|
| Serine
utilization
|
tgsA
|
| Siderophore
biosynthesis
|
sreA
|
| Sorbitol
utilization
|
sbA,
ssbA
|
| Sorbose
resistance
|
sorA,B
|
| Spermidine
biosynthesis
|
spdA
|
| Spermidine
sensitivity
|
spsA
|
| Sphingolipid
biosynthesis
|
aurA,
lcbA,B, surA
|
| Sterigmatocystin
biosynthesis
|
laeA,
pkaC, pksS,T, stcA-Z,
|
| Stress
related
|
hogA,
mkkA, msnA, pbsA, pmA, ptpA, shoA, skoA,
slnA, sltA, sskA, steB, tprA
|
| Succinate
utilization
|
sucA
|
| Sulphate
utilization
|
sA-G
|
| Sulphur
metabolism regulation
|
sconA-D
|
| Sumoylation
|
sumO, ubcN
|
| Terrequinone
biosynthesis
|
tdiA-F
|
| Thiamine
biosynthesis
|
thiA,F,
anA,B
|
| Threonine
utilization
|
tgsA,
tguA-C, tutA-E
|
| Trehalase
metabolism
|
treA,B,
pkaR, vosA
|
| Tryptophan
biosynthesis
|
anthA-D,
nicA,B, indA, trpA-E
|
| Tryptophan
utilization
|
fpaL
|
| Tyrosine
catabolism
|
fahA,
hmgA, maiA
|
| Tyrosine
biosynthesis
|
fpaA,
tyrB
|
| Ubiquitination
|
csnD,E,
creB
|
| Unsaturated
fatty acid biosynthesis
|
ufaA
|
| Ubiquinone/menaquinone
biosynthesis
|
umtA
|
| Ubiqutination
|
apyA
|
| Urea
utilization
|
ureA-E
|
| Uric
acid utilization
|
muyA,B,
uapA-C, uaX-Z
|
| Xanthine
utilization
|
hxA,B,
uapA-C, xanA
|
| Xylan
and xylose catabolism
|
xlnA-D
|