Aspergillus Bibliography 2010

 

This bibliography attempts to cover genetical and biochemical publications on Aspergillus nidulans and also includes selected references to related species and topics.  Entries have been checked as far as possible, but please tell me of any errors and omissions.  Authors are kindly requested to send a copy of each article to the FGSC for its reprint collection.

 

John Clutterbuck. School of Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow. Present address: Flat B/R, 43 Partickhill Road, Glasgow G11 5BY, Scotland, UK. 

Email: jclutterbuck481@btinternet.com

 

Author Index

Keyword Index

 

1. Aguilar-Osorio, G., vanKuyk, P.A., Seiboth, B., Blom, D., Solomon, P.S., Vinck, A., Kindt, F., Wösten, H.A.B. & de Vries, R.P. 2010 Spatial and developmental differentiation of mannitol dehydrogenase and mannitol-1-phosphate dehydrogenase in Aspergillus niger. Eukaryot. Cell 9: 1398-1402

2. Ahmed, S., Rinz, S. & Jamil, A. 2009 Molecular cloning of fungal xylanases. Appl. Microbiol. Biotechnol. 84: 19-35

3. Amich, J., Vicentefranqueira, R., Leal, F. & Calera, J.A. 2010 Aspergillus fumigatus survival in alkaline and extreme zinc-limiting environments relies on the induction of a zinc homeostasis system encoded by the zrfC and aspf2 genes. Eukaryot. Cell 9: 424-437

4. Antony-Babu, S. & Singleton, I. 2009 Effect of ozone on spore germination, spore production and biomass production in two Aspergillus species. Ant. van Leeuwenhoek.  96: 413-422

5. Baker, S.E. 2009 Selection to sequence: opportunities in fungal genomics. Env. Microbiol. 11:2955-2958

6. Balázs, A., Pócsi, I., Hamari, Z., Leiter, E., Emri, T., Miskei, M., Oláh, J., Tóth, V., Hegedús, N., Prade, R.A., Molnár, M. & Pócsi, I. 2010 AtfA bZIP-type transcription factor regulates oxidative and osmotic stress responses in Aspergillus nidulans. Mol. Gen. Genom. 283:289-303

7. Barakat, H., Spielvogel, A., Hassan, M., El-Desouky, A., El-Mansy, H., Rath, F., Meyer, V. & Stahl, U. 2010 The antifungal protein AFP from Aspergillus giganteus prevents secondary growth of different Fusarium species on barley. Appl. Microbiol. Biotechnol. 87: 617-624

8. Bauer, I., Graessle, S., Loidl, P., Hohenstein, K. & Brosch, G. 2010 Novel insights into the functional role of three protein arginine methyltransferases in Aspergillus nidulans. Fungal Genet. Biol. 47:551-561

9. Bayram, Ö., Braus, G.H., Fischer, R. & Rodriguez-Romero, J. 2010 Spotlight on Aspergillus nidulans photosensory systems. Fungal Genet. Biol. 47: 900-908

10. Beckham, K.S., Potter, J.A. & Unkles, S.E. 2010 Formate-nitrite transporters: optimisation of expression, purification and analysis of prokaryotic and eukaryotic representatives. Protein Expres. Purif. 71: 184-189

11. Behera, B.C., Sonone, A. & Makhija, U. 2009 Protoplast isolation from cultured lichen Usnea ghattensis, their fusion with protoplasts of Aspergillus nidulans, fusant regeneration and production of usnic acid. Folia Microbiol. 54:415-418

12. Bien, V.M. & Espenshade, P.J. 2010 Sterol regulatory element binding proteins in fungi: hypoxic transcription factors linked to pathogenesis. Eukaryot. Cell 9: 352-359

13. Binder, U., Chu, M., Read, N.D. & Marx, F. 2010 The antifungal activity of the Penicillium chrysogenum protein PAF disrupts calcium homeostasis in Neurospora crassa. Eukaryot. Cell 9: 1374-1382

14. Binder, U., Oberparleiter, C., Meyer, V. & Marx, F. 2010 The antifungal protein PAF interferes with PKC/MPK and cAMP/PKA signalling of Aspergillus nidulans. Mol. Microbiol. 75: 294-307

15. Bok. J.W., Chiang, Y.-M., Szewczyk, E., Reyes-Dominguez, Y., Davidson, A.D., Sanchez, J.F., Lo, H.-C., Watanabe, K., Strauss, J., Oakley, B.R., Wang, C.C.C. & Keller, N.P. 2009 Chromatin-level regulation of biosynthetic gene clusters. Nat. Chem. Biol. 5: 462-464, comment: pp. 450-452. corrigendum p. 696.

16. Brambl, R. 2009 Fungal physiology and the origins of molecular biology. Microbiol. 154: 3799-3809

17. Brodhun, F., Schneider, S., Göbel, C., Hornung, E. & Feussner, I. 2010 PpoC from Aspergillus nidulans is a fusion protein with only one active haem. Biochem. J. 425:553-565

18. Brown-Marshall, C.D., Diebold, A.R. & Solomon, E.I. 2010 Reaction coordinate of isopenicillin N synthase: oxidase versus oxygenase activity. Biochem. 49: 1176-1182

19. Bugeja, H.E., Hynes, M.J. & Alexopoulos, A. 2010 The RFX protein RfxA is an essential regulator of growth and morphogenesis in Penicillium marneffei. Eukaryot. Cell 9: 578-591

20. Cairns, T., Minjuzzi, F. & Bignell, E. 2010 The host-infecting fungal transcriptome. FEMS Lett. 307: 1-11

21. Cao, W., Maruyama, J.-i., Kitamoto, K., Sumikoshi, K., Terada, T., Nakamura, S. & Shimizu, K. 2009 Using a new GPI-anchored-protein identification system to mine the protein databases of Aspergillus fumigatus, Aspergillus nidulans, and Aspergillus oryzae. J. Gen. Appl. Microbiol. 55:381-393

22. Cardoso, R.A., Pires, L.T.A., Zucchi, T.D., Zucchi, F.D. & Zucchi, T.M.A.D. 2010 Mitotic crossing-over induced by two commercial herbicides in diploid strains of the fungus Aspergillus nidulans. Genet. Mol. Res. 9: 231-238

23. Carr, P.D., Tuckwell, D., Hey, P.M., Simon, L., d'Enfert, C., Birch, M., Oliver, J.D. & Bromley, M.J. 2010 The transposon impala is activated by low temperatures: use of a controlled transposition system to identify genes critical for viability of Aspergillus fumigatus. Eukaryot. Cell 9: 438-448

24. Carvalho, N.D.S.P., Arentshorst, M., Kwon, M.J., Meyer, V. & Ram, A.F.J. 2010 Expanding the ku70 toolbox for filamentous fungi: establishment of complementation  vectors and recipient strains for advanced gene analysis. Appl. Microbiol. Biotechnol. 87: 1463-1473

25. Chellegatti, M.A.S.C., Yuvamoto, P.D. & Said, S. 2010 Role of phospholipase C and protein kinase C in Aspergillus nidulans during growth on pectin or glucose: Effects on germination and duplication cycle. Folia Microbiol. 55:228-232

26. Chen, S., Song, Y., Cao, J., Wang, G., Wei, H., Xu, X. & Lu, L. 2010 Localization and function of calmodulin in live-cells of Aspergillus nidulans. Fungal Genet. Biol. 47:268-278

27. Chen, X.-a., Ishida, N., Todaka, N., Nakamura, R., Maruyama, J.-i., Takahashi, H. & Kitamoto, K. 2010 Promotion of efficient saccharification of crystalline cellulose by Aspergillus fumigatus Swo1. Appl. Env. Microbiol. 76: 2556-2561

28. Chiang, Y.-M., Oakley, B.R., Keller, N.P. & Wang, C.C.C. 2010 Unravelling polyketide synthesis in members of the genus Aspergillus. Appl. Microbiol. Biotechnol. 86: 1719-1736

29. Chiang, Y.-M., Szewczyk, E., Davidson, A.D., Entwistle, R., Keller, N.P., Wang, C.C.C. & Oakley, B.R. 2010 Characterization of the Aspergillus nidulans monodictyphenone gene cluster. Appl. Env. Microbiol. 76: 2067-2074

30. Chiang, Y.-M., Szewczyk, E., Davidson, A.D., Keller, N.P., Oakley, B.R. & Wang, C.C.C. 2009 A gene cluster containing two fungal polyketide synthases encodes the biosynthetic pathway for a polyketide, asperfuranone, in Aspergillus nidulans. J. Am. Chem. Soc. 131: 2965-2970

31. de Castro-Prado, J., Franco, C.C.da S., de Sant'Anna, J.R., Miyamoto, C.T. & de Castro-Prado. M.A.A. 2009 Recombinogenic activity of fluoxetine in Aspergillus nidulans. Drug Chem. Toxicol..  32: 338-343

32. de Oliveira, J.M.P.F., van Passel, M.W.J., Schaap, P.J. & de Graaf, L.H. 2010 Shotgun proteomics of Aspergillus niger microsomes upon D-xylose induction. Appl. Env. Microbiol. 76: 4421-4429

33. Dichtl, K., Ebel, F., Dirr, F., Routier, F.H., Heesemann, J. & Wagener, J. 2010 Farnesol misplaces tip-localized Rho proteins and inhibits cell wall integrity signalling in Aspergillus fumigatus. Mol. Microbiol. 76: 1191-1204

34. Drioch, H., Roth, A., Dersch, P. & Wittmann, C. 2010 Optimized bioprocess for production of fructofuranosidase by recombinant Aspergillus niger. Appl. Microbiol. Biotechnol. 87: 2011-2024

35. Ehrlich, K.C., Chang, P.-K., Scharfenstein, L.L.Jr., Cary, J.W., Crawford, J.M. & Townsend, C.A. 2010 Absence of the aflatoxin biosynthesis gene, norA, allows accumulation of deoxyaflatoxin B1 in Aspergillus flavus cultures. FEMS Microbiol. Lett. 305: 65-70

36. Ejzykowicz, D.E., Solis, N.V., Gravelat, F.N., Chabot, J., Li, X., Sheppard, D.C. & Filler, S.G. 2010 Role of Aspergillus fumigatus DvrA in host cell interactions and virulence. Eukaryot. Cell 9: 1432-1440

37. El-Ganiny, A.M., Sheoran, I., Sanders, D.A.R. & Kaminskij, S.G.W. 2010 Aspergillus nidulans UDP-glucose-4-epimerase UgeA has multiple roles in wall architecture, hyphal morphogenesis, and asexual development. Fungal Genet. Biol. 47:629-635

38. Etxebeste, O., Markina-Iñarrairaegui, A., Garzia, A., Herrero-García, E., Ugalde, U. & Espeso, E.A. 2009 KapI, a non-essential member of the Pse1p/Imp5 karyopherin family, controls colonial and asexual development in Aspergillus nidulans. Microbiol. 155: 3934-3945

39. Fang, W., Ding, W., Wang, B., Zhou, H., Ouyang, H., Ming, J. & Jin, C. 2010 Reduced expression of the O-mannosyltransferase 2 (AfPmt2) leads to deficient cell wall and abnormal polarity in Aspergillus fumigatus. Glycobiol. 20: 542-552

40. Fang, W., Yu, X., Wang, B., Zhou, H., Ouyang, H., Ming, J. & Jin, C. 2009 Characterization of the Aspergillus fumigatus phosphomannose isomerase Pmi1 and its impact on cell wall synthesis and morphogenesis. Microbiol. 155: 3281-3293

41. Findon, H., Calcagogno-Pizarelli, A.-M., Martínez, J.L., Spielvogel, A., Markina-Iñarrairaegui, A., Indrakumar, T., Ramos, J., Peñalva, M.A., Espeso, E.A. & Arst, H.N.Jr. 2010 Analysis of a novel calcium auxotrophy in Aspergillus nidulans. Fungal Genet. Biol. 47: 647-655

42. Fleck, C.B. & Brock, M. 2010 Aspergillus fumigatus catalytic glucokinase and hexokinase: expression analysis and importance for germination, growth, and conidiation. Eukaryot. Cell 9: 1120-1135

43. Fleißner, A. & Dersch, P. 2010 Expression and export: recombinant protein production systems for Aspergillus. Appl. Microbiol. Biotechnol. 87: 1255-1277

44. Fontaine, T., Beauvais, A., Loussert, C., Thevenard, B., Fuigsang, C.C., Ohno, N., Clavaud, C., Prevost, M.-C. & Latgé, J.-P. 2010 Cell wall a1-3glucans induce the aggregation of germinating conidia of Aspergillus fumigatus. Fungal Genet. Biol. 47: 707-712

45. Frandsen, R.J.N., Albertsen, K.S., Stougaard, P., Sørensen, J.L., Nielsen, K.F., Olsson, S. & Giese, H. 2010 Methylenetetrahydrofolate reductase activity is involved in the plasma membrane redox system required for pigment biosynthesis in filamentous fungi. Eukaryot. Cell 9: 1225-1235

46. Gamarra, N.N., Villena, G.K. & Gutiérrez-Correa, M. 2010 Cellulase production by Aspergillus niger in biofilm, solid-state, and submerged fermentations. Appl. Microbiol. Biotechnol. 87: 545-551

47. Garzia, A., Etxebeste, O., Herrero-García, E., Ugalde, U. & Espeso, E.A. 2010 The concerted action of bZip and cMyb transcription factors FlbB and FlbD induces brlA expression and asexual development in Aspergillus nidulans. Mol. Microbiol. 75: 1314-1324

48. Gastebois, A., Fontaine, T., Latgé, J.-P. & Mouyna, I. 2010 b(1-3)glucanosyltransferase Gel4p is essential for Aspergillus fumigatus. Eukaryot. Cell 9: 1294-1298

49. Ge, W., Clifton, I.J., Stok, J.E., Adlington, R.M., Baldwin, J.E. & Rutledge, P.J. 2010 The crystal structure of an LLL-configured depsipeptide substrate analogue bound to isopenicillin N synthase. Org. Biomol. Chem. 8: 122-127

50. Gehrke, A., Heinekamp, T., Jacobsen, I.D. & Brakhage, A.A. 2010 Heptahelical receptors GprC and GprD of Aspergillus fumigatus are essential regulators of colony growth, hyphal morphogenesis, and virulence. Appl. Env. Microbiol. 76: 3989-3998

51. Godet, M. & Munaut, F. 2010 Molecular strategy for identification in Aspergillus section Flavi. FEMS Microbiol. Lett. 304: 157-168

52. Gonzales, F.P., da Silva, S.H., Roberts, D.W. & Braga, G.U. 2010 Photodynamic inactivation of conidia of the fungi Metarhizium anisopliae and Aspergillus nidulans with methylene blue and toluidine blue. Photochem. Photobiol. 86: 653-661

53. Gournas, C., Amillis, S., Vlanti, A. & Diallinas, G. 2010 Transport-dependent endocytosis and turnover of a uric acid-xanthine permease. Mol. Microbiol. 75: 246-260

54. Gravelat, F.N., Ejzykowicz, D.E., Chiang, L.Y., Chabot, J.C., Urb, M., Macdonald, K.D., al-Bader, N., Filler, S.G. & Sheppard, D.C. 2010 Aspergillus fumigatus MedA governs adherence, host cell interactions and virulence. Cell. Microbiol. 12: 473-488

55. Han, K.-H., Chun, Y,-H., Figueiredo, B.De C.P., Soriani, F.M., Savoldi, M., Almeida, A., Rodriguez, F., Cairns, C.T., Bignell, E., Tobal, J.M., Goldman, M.H.S., Kim, J.-H., Bahn, Y.-S., Goldman, G.H. & Fereira, M.E.Da S. 2010 The conserved and divergent roles of carbonic anhydrases in filamentous fungi Aspergillus fumigatus and Aspergillus nidulans. Mol. Microbiol. 75: 1372-1388

56. Han, M.-J., Kim, N.-J., Lee, S.Y. & Chang, H.N. 2010 Extracellular proteome of Aspergillus terreus grown on different carbon sources. Curr. Genet. 56: 369-382

57. Hartmann, T., Dümig, M., Jaber, B.M., Szewczyk, E., Olbermann, P., Morschhäuser, J. & Krappmann, S. 2010 Validation of a self-excising marker in the human pathogen Aspergillus fumigatus by employing the b-rec/six site-specific recombination system. Appl. Env. Microbiol. 76: 6313-6317

58. Hasegawa, S., Takizawa, M., Suyama, H., Shintani, T. & Gomi, K. 2009 Characterization and expression analysis of a maltose-utilizing (MAL) cluster in Aspergillus oryzae. Fungal Genet. Biol. 47:1-9, erratum p. 497.

59. Hervás-Aguilar, A., Galindo, A. & Peñalva, M.A. 2010 Receptor-independent ambient pH signaling by ubiquitin attachment to fungal arrestin-like PalF. J. Biol. Chem. 285:18095-180102

60. Hervás-Aguilar, A. & Peñalva, M.A. 2010 Endocytic machinery protein is dispensable for polarity establishment but necessary for polarity maintenance in hyphal tip cells of Aspergillus nidulans. Eukaryot. Cell 9: 1504-1518

61. Hervás-Aguilar, A., Rodriguez-Galán, O., Galindo, A., Abenza, J.F., Arst, H.N.Jr. & Peñalva, M.A. 2010 Characterization of Aspergillus nidulans DidBDid2, a non-essential component of the multivesicular body pathway. Fungal Genet. Biol. 47: 636-646

62. Hoff, B., Kamerewerd, J., Sigl, C., Mitterbauer, R., Zadra, I., Kürsteiner, H. & Kück, U. 2010 Two components of a velvet-like complex control hyphal morphogenesis, conidiophore development, and penicillin biosynthesis in Penicillium chrysogenum. Eukaryot. Cell 9: 1236-1250

63. Hoff, B., Kamerewerd, J., Sigl, C., Zadra, I. & Kück, U. 2009 Homologous recombination in the antibiotic producer Penicillium chrysogenum: strain DPcku70 shows up-regulation of genes from the HOG pathway. Appl. Microbiol. Biotechnol. 85: 1081-1094

64. Hoi, J.W.S. & Dumas, B. 2010 Ste12 and Ste12-like proteins, fungal transcription factors regulating development and pathogenicity.  Eukaryot. Cell 9: 480-485

65. Hynes, M.J. & Murray, S.L. 2010 ATP-citrate lyase is required for production of cytosolic acetyl coenzyme A and development in Aspergillus nidulans. Eukaryot. Cell 9: 1039-1048

66. Hynes, M.J., Murray, S.L. & Kahn, F.K. 2010 Deletion of the RING-finger peroxin 2 gene in Aspergillus nidulans does not affect meiotic development. FEMS Microbiol. Lett. 306: 67-71

67. Jackson-Hayes, L., Hill, T.W., Loprete, D.M., Gordon, B.S., Groover, C.J., Johnson, L.R. & Martin, S.A. 2010 GDP-mannose transporter paralogues play distinct roles in polarized growth of Aspergillus nidulans. Mycologia 102: 305-310

68. Jin, F.J., Takahashi, T., Machida, M. & Koyama, Y. 2009 Identification of a basic helix-loop-helix-type transcription regulator gene in Aspergillus oryzae by systematically deleting large chromosome segments. Appl. Env. Microbiol. 75: 5943-5951

69. Jin, F.J., Takahashi, T., Utsushikawa, M., Furukido, T., Nishida, M., Ogawa, M., Tokuoka, M. & Koyama, Y. 2010 A trial of minimization of chromosome 7 in Aspergillus oryzae by multiple chromosomal deletions. Mol. Gen. Genomics 283: 1-12

70. Jørgensen, T.R., Nitsche, B.M., Lamers, G.E., Arentshorst, M., van den Hondel, C.A. & Ram, A. 2010 Transcriptomic insights into the physiology of Aspergillus niger approaching a specific growth rate of zero. Appl. Env. Microbiol. 76: 5344-5355

71. Khaldi, N., Seifudin, F.T., Turner, G., Haft, D., Nierman, W.C., Wolfe, K.H. & Fedorova, N.D. 2010 SMURF: genomic mapping of fungal secondary metabolite clusters. Fungal Genet. Biol. 47: 736-741

72. Kim, B., Sullivan, R.P. & Zhao, H. 2010 Cloning, characterization, and engineering of fungal L-arabinitol dehydrogenases. Appl. Microbiol. Biotechnol. 87: 1407-1414

73. Kojima, T., Hashimoto, Y., Kato, M., Kobayashi, T. & Nakano, H. 2010 High-throughput screening of DNA binding sites for transcription factor AmyR from Aspergillus nidulans using DNA beads display system. J. Biosci. Bioeng. 109:519-525

74. Konwarth, R., Kalita, D., Mahanta, C., Mandal, M. & Karak, N. 2010 Magnetically recyclable, antimicrobial, and catalytically enhanced polymer-assisted “green” nanosystem-immobilized Aspergillus niger amyloglucosidase. Appl. Microbiol. Biotechnol. 87: 1983-1992

75. Kosti, V., Papageorgiou, I. & Diallinas, G. 2010 Dynamic elements at both cytoplasmically and extracellularly facing sides of the UapA transporter selectively control the accessibility of substrates to their translocation pathway. J. Mol. Biol. 397:1132-1143

76. Kotz, A., Wagener, J., Engel, J., Routier, F., Echtenacher, B., Pich, A., Rohde, M., Hoffmann, P., Heesemann, J. & Ebel, F. 2009 The mitA gene of Aspergillus fumigatus is required for mannosylation of inositol-phosphorylceramide, but is dispensable for pathogenicity. Fungal Genet. Biol. 47:169-178

77. Kück, U. & Hoff, B. 2010 New tools for the genetic manipulation of filamentous fungi. Appl. Microbiol. Biotechnol. 86: 51-62

78. Kwon, N.-J., Garzia, A., Espeso, E.A., Ugalde, U. & Yu, J.-H. 2010 FlbC is a putative C2H2 transcription factor regulating development in Aspergillus nidulans. Mol. Microbiol. 77: 1203-1219

79. Lambou, K., Lamarre, C., Beau, R., Dufour, N. & Latgé, J.-P. 2010 Functional analysis of the superoxide dismutase family in Aspergillus fumigatus. Mol. Microbiol. 75: 910-923

80. Lee, H.-U., Park, J.-B., Lee, H., Chae, K.-S., Han, D.-M. & Jahng, K.-Y. 2010 Predicting the chemical composition and structure of Aspergillus nidulans hyphal wall surface by atomic force microscopy. J. Microbiol. 48: 243-248

81. Levdansky, E., Kashi, O., Sharon, H., Shadkchan, Y. & Osherov, N. 2010 The Aspergillus fumigatus cspA gene encoding a repeat-rich cell wall protein is important for normal conidial cell wall architecture and interaction with host cells. Eukaryot. Cell 9: 1403-1415

82. Li, C.-Y., Liu, L., Yang, J., Li, J.-B., Su, Y., Zhang, Y., Wang, Y.Y. & Zhu, Y.-Y. 2009 Genome-wide analysis of microsatellite sequence in seven filamentous fungi. Interdisc. Sci. Comput. Life Sci. 1: 141-150

83. Lindsey, R., Cowden, S., Hernández-Rodríguez, Y. & Momany, M. 2010 Septins AspA and AspC are important for normal development and limit the emergence of new growth foci in the multicellular fungus Aspergillus nidulans. Eukaryot. Cell 9: 155-163

84. Liu, H.L., Osmani, A.H., Ukil, L., Son, S., Markossian, S., Shen, K.-F., Govindaraghavan, M., Varadaraj, A., Hashmi, S.B., De Souza, C.P. & Osmani, S.A. 2010 Single-step affinity purification for fungal proteomics. Eukaryot. Cell 9: 831-833

85. López-Villavicencio, M., Aguileta, G., Giraud, T., de Vienne, D.M., Lacoste, S., Couloux, A. & Dupont, J. 2010 Sex in Penicillium: combined phylogenetic and experimental approaches. Fungal Genet. Biol. 47:693-706

86. Luo, Y., Gao, W. & Doster, T.J. 2009 Quantification of conidial density of Aspergillus flavus and A. parasiticus in soil from almond orchards using real-time PCR. J. Appl. Microbiol. 106: 1649-1660

87. Malandra, A., Cantarella, M., Kaplan, O., Vejvoda, V., Uhnáková, B., Stepánková, B., Kubác, D. & Martínková, L. 2009 Continuous hydrolysis of 4-cyanopyridine by nitrilases from Fusarium solani 01 and Aspergillus niger K10. Appl. Microbiol. Biotechnol. 85: 277-284

88. Marui, J., Yoshima, A., Hagiwara, D., Fujii-Watanabe, Y., Oda, K., Koike, H., Tamano, K., Ishii, T., Sano, M., Machida, M. & Abe, K. 2009 Use of Aspergillus oryzae actin gene promoter in a novel reporter system for exploring antifungal compounds and their target genes. Microbiol. Biotechnol. 87: 1829-1840

89. Meijer, S., de Jongh, W.A., Olsson, L. & Nielsen, J. 2009 Physiological characterization of acuB deletion in Aspergillus niger. Appl. Microbiol. Biotechnol. 84: 157-167

90. Min, I.S., Bang, J.Y., Seo, S.W., Lee, C.H. & Maeng, P.J. 2010 Differential expression of citA gene encoding the mitochondrial citrate synthase of Aspergillus nidulans in response to developmental status and carbon sources. J. Microbiol. 48: 188-198

91. Mircus, G., Hagag, S., Levdansky, E., Sharon, H., Shadkchan, Y., Shalit, I. & Osherov, N. 2009 Identification of novel cell wall destabilizing antifungal compounds using a conditional Aspergillus nidulans protein kinase C mutant. J. Antimicrob. Chemother. 64: 755-763

92. Miyamoto, C.T., Sant'Anna, J.R., Franco, C.C. da S., Cunico, M.M., Miguel, O.G., Cocco, L.C., Yamamoto, C.I., Correa, C. Jr. & de Castro-Prado, M.A.A. 2009 Genotoxic activity of Eucalyptus globulus essential oil in Aspergillus nidulans diploid cells. Folia Microbiol. 54: 493-498

93. Mojzita, D., Wiebe, M., Hilditch, S., Boer, H., Penttilä, M. & Richard, P. 2010 Metabolic engineering of fungal strains for conversion of D-galacturonate to meso-galactarate. Appl. Env. Microbiol. 76: 169-175

94. Monteiro, M.C. & De Lucas, J.R. 2009 Study of the essentiality of the Aspergillus fumigatus triA gene, encoding RNA triphosphatase, using the heterokaryon rescue technique and the conditional gene expression driven by the alcA and niiA promoters. Fungal Genet. Biol. 47:66-79

95. Morita, H., Okamoto, A., Yamagata, Y., Kusumoto, K., Koide, Y., Ishida, H. & Takeuchi, M. 2009 Heterologous expression and characterization of CpI, OcpA, and novel serine-type carboxypeptidase OcpB from Aspergillus oryzae. Appl. Microbiol. Biotechnol. 85: 335-346

96. Morozov, I.Y., Jones, M.G., Razak, A.A., Rigden, D.J. & Caddick, M.X. 2010 CUCU modification of mRNA promotes decapping and transcript degradation in Aspergillus nidulans. Mol. Cell. Biol. 30: 460-469

97. Morozov, I.Y., Jones, M.G., Spiller, D.G., Rigden, D.J., Dattenböck. C., Novotny, R., Strauss, J. & Caddick, M.X. 2010 Distinct roles for Caf1, Ccr4, Edc3 and CutA in the co-ordination of transcript deadenylation, decapping and P-body formation in Aspergillus nidulans. Mol. Microbiol. 76: 503-516, correction p. 802.

98. Morschhäuser, J. 2009 Regulation of multidrug resistance in pathogenic fungi. Fungal Genet. Biol. 47:94-106

99. Mouyna, I., Kniemeyer, O., Jank, T., Loussert, C., Mellado, E., Aimanianda, V., Beauvais, A., Wartenberg, D., Sarfati, J., Bayry, J., Prévost, M.-C., Brakhage, A.A., Strahl, S., Huerre, M. & Latgé, J.-P. 2010 Members of protein O-mannosyltransferase family in Aspergillus fumigatus differentially affect growth, morphogenesis and viability. Mol. Microbiol. 76: 1205-1221

100. Mullaney, E.J., Locovare, H., Sethumadhavan, K., Boone, S., Lei, X.G. & Ullah, A.H.J. 2010 Site-directed mutagenesis of disulphide bridges in Aspergillus niger NRRL 3135 phytase (PhyA), their expression in Pichia pastoris and catalytic characterization. Appl. Microbiol. Biotechnol. 87: 1367-1372

101. Murray, S.L. & Hynes, M.J. 2010 Metabolic and developmental effects resulting from deletion of the citA gene encoding citrate synthase in Aspergillus nidulans. Eukaryot. Cell 9: 656-666

102. Nakahama, T., Nakanishi, Y., Viscomi, A.R., Takaya, K., Kitamoto, K., Ottonello, S. & Arioka, M. 2010 Distinct enzymatic and cellular characteristics of two secretory phospholipases A2 in the filamentous fungus Aspergillus oryzae. Fungal Genet. Biol. 47:318-331

103. Nakai, H., Baumann, M.J., Petersen, B.O., Westphal, Y., Hachem, M.A., Dilokpimol, A., Duus, J.Ø., Schols, H.A. & Svensson, B. 2010 Aspergillus nidulans a-galactosidase of glycoside hydrolase family 36 catalyses the formation of a-galacto-oligosaccharides by transglycosylation. FEBS J. 277: 3538-3551

104. Nayak, T., Edgerton-Morgan, H., Horio, T., Xiong, Y., De Souza, C.P., Osmani, S.A. & Oakley, B.R. 2010 g-tubulin regulates the anaphase-promoting complex/cyclosome during interphase. J. Cell Biol. 190:317-330

105. Nicholson, M.J., Koulman, A., Monahan, B.J., Pritchard, B.L., Payne, G.A. & Scott, B. 2009 Identification of two aflatrem biosynthesis gene loci in Aspergillus flavus and metabolic engineering of Penicillium paxilli to elucidate their function. Appl. Env. Microbiol. 75: 7469-7481

106. Noguchi, Y., Sano, M., Kanamaru, K., Ko, T., Takeuchi, M., Kato, M. & Kobayashi, T. 2009 Genes regulated by AoXlnR, the xylanolytic and cellulolytic transcriptional regulator, in Aspergillus oryzae. Appl. Microbiol. Biotechnol. 85: 141-154

107. Ogawa, M., Tokuoka, M., Jin, F.J., Takahashi, T. & Koyama, Y. 2010 Genetic analysis of conidiation regulatory pathways in koji-mold Aspergillus oryzae. Fungal Genet. Biol. 47:10-18

108. Oh, Y.T., Ahn, C.-S., Kim, J.G., Ro, H.-S., Lee, C.-W. & Kim, J.W. 2010 Proteomic analysis of early phase of conidia germination in Aspergillus nidulans. Fungal Genet. Biol. 47:246-253

109. Okabe, M., Lies, D., Kanamasa, S. & Park, E.Y. 2009 Biotechnological production of itaconic acid and its biosynthesis in Aspergillus terreus. Appl. Microbiol. Biotechnol. 84: 597-606

110. Pantazopoulou, A. & Peñalva, M.A. 2009 Organization and dynamics of the Aspergillus nidulans Golgi during apical extension and mitosis. Mol. Biol. Cell 20: 4335-4347

111. Peña-Montes, C., Lange, S., Flores, I., Castro-Ochoa, D., Schmid, R., Cruz-García, F. & Farrés, A. 2009 Molecular characterization of StcI esterase from Aspergillus nidulans. Appl. Microbiol. Biotechnol. 84: 917-926

112. Pinchai, N., Juvvadi, P.R., Fortwendel, J.R., Perfect, B.Z., Rogg, L.E., Asfaw, Y.G. & Steinbach, W.J. 2010 The Aspergillus fumigatus P-type golgi apparatus Ca2+/Mn2+ ATPase PmrA is involved in cation homeostasis and cell wall integrity but is not essential for pathogenesis. Eukaryot. Cell 9: 472-476

113. Pisanelli, I., Kujawa, M., Gschnitzer, D., Spadiut, O., Seiboth, B., Peterbauer, C. 2010 Heterologous expression of an Agaricus meleagris pyranose dehydrogenase-encoding gene in Aspergillus spp. and characterization of the recombinant enzyme. Appl. Microbiol. Biotechnol. 86: 599-606

114. Plumridge, A., Melin, P., Stratford, M., Novodvorska, M., Shunburne, L., Dyer, P.S., Roubos, J.A., Menke, H., Stark, J., Stam, H. & Archer, D.B. 2010 The decarboxylation of the weak-acid preservative, sorbic acid, is encoded by linked genes in Aspergillus spp. Fungal Genet. Biol. 47: 683-692

115. Pócsi, I., Leiter, E., Kwon, N.-J., Shin, K.-S., Kwon, G.-S., Pusztahelyi, T., Emri, T., Abuknesha, R.A., Price, R.G. & Yu, J.-H. 2009 Asexual sporulation signalling regulates autolysis of Aspergillus nidulans via modulating the chitinase ChiB production. J. Appl. Microbiol. 107: 514-523

116. Puttikamonkul, S., Willger, S.D., Grahl, N., Perfect, J.R., Movahed, N., Bothner, B., Park, S., Paderu, P., Perlin, D.S. & Cramer, R.A.Jr. 2010 Trehalose 6-phosphate phosphatase is required for cell wall integrity and fungal virulence but not trehalose biosynthesis in the human fungal pathogen Aspergillus fumigatus. Mol. Microbiol. 77: 891-911

117. Reiser, K., Davis, M.A. & Hynes, M.J. 2010 Aspergillus nidulans contains six possible fatty acyl-CoA synthetases with FaaB being the major synthetase for fatty acid degradation. Arch. Microbiol. 192:373-382

118. Reiser, K., Davis, M.A. & Hynes, M.J. 2010 AoxA is a major peroxisomal long chain fatty acyl-CoA oxidase required for b-oxidation in A. nidulans. Curr. Genet. 56:139-150

119. Reverberi, M., Punelli, F., Scarpari, M., Camera, E., Zjalic, S., Ricelli, A., Fanelli, C. & Fabbri, A.A. 2010 Lipoperoxidation affects ochratoxin A biosynthesis in Aspergillus ochraceus and its interaction with wheat seeds. Appl. Microbiol. Biotechnol. 85:1935-1946

120. Reyes-Dominguez, Y., Bok, J.W., Berger, H., Schwab, E.K., Basheer, A., Gallmetzer, A., Scazzocchio, C., Keller, N. & Strauss, J. 2010 Heterochromatic marks are associated with the repression of secondary metabolism clusters in Aspergillus nidulans. Mol. Microbiol. 76: 1376-1386

121. Robellet, X., Oestreicher, N., Guitton, A. & Vélot, C. 2010 gene silencing of transgenes inserted in the Aspergillus nidulans alcM and/or alcS loci. Curr. Genet. 56: 341-348

122. Rodríguez-Urra, A.B., Jimenez, C., Dueñas, M. & Ugalde, U. 2009 Bicarbonate gradients modulate growth and colony morphology in Aspergillus nidulans. FEMS Microbiol. Lett. 300: 216-221

123. Roth, A.H.F.J. & Dersch, P. 2010 A novel expression system for intracellular production and purification of recombinant affinity-tagged proteins in Aspergillus niger. Appl. Microbiol. Biotechnol. 86:659-570

124. Roumelioti, K., Vangelatos, I. & Sophianopoulou, V. 2010 A cryptic role of a glycolytic-gluconeogenic enzyme (aldolase) in amino acid transporter turnover in Aspergillus nidulans. Fungal Genet. Biol. 47:254-267

125. Salazar, M., Vongsangnak, W., Panagiotou, G., Andersen, M.R. & Nielsen, J. 2009 Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysis. Mol. Gen. Genomics: MGG 282:571-586

126. Sanchez, J.F., Chiang, Y.-M., Szewczyk, E., Davidson, A.D., Ahuja, M., Oakley, E.C., Bok, J.W., Keller, N., Oakley, B.R. & Wang, C.C.C. 2010 Molecular genetic analysis of the orsellinic acid/F9775 gene cluster of Aspergillus nidulans. Mol. Biosyst. 6: 587-593

127. Santhiya, D., Burghard, Z., Greiner, C., Jeurgens, L.P.H., Subkowski, T. & Bill, J. 2010 Bioinspired deposition of TiO2 thin films induced by hydrophobins. Langmuir 26: 6494-6502

128. Scherlach, K., Schuemann, J., Dahse, H.-M. & Hertweck, C. 2010 Aspernidine A and B, prenylated isoindolinone alkaloids from the model fungus Aspergillus nidulans. J. Antibiot. 63: 375-377

129. Schmoll, M., Seibel, C., Kotlowski, C., Vendt, F.W.G., Liebmann, B. & Kubicek, C.P. 2010 Recombinant production of an Aspergillus nidulans  class I hydrophobin (DewA) in Hypochrea jecorina (Trichoderma reesei) is promoter-dependent. Appl. Microbiol. Biotechnol. 88: 95-103

130. Schneider, T., Gerrits, B., Gassmann, R., Schmid, E., Gessner, M.O., Richter, A., Battin, T., Eberl, L. & Riedel, K. 2010 Proteome analysis of fungal and bacterial involvement in leaf litter decomposition. Proteomics 10: 1819-1830

131. Schöbel, F., Jacobsen, I.D. & Brock, M. 2010 Evaluation of lysine biosynthesis as an antifungal target: biochemical characterization of Aspergillus fumigatus homicitrate synthase and virulence studies. Eukaryot. Cell 9: 878-893

132. Schoustra, S.E., Bataillon, T., Gifford, D.R. & Kassen, R. 2009 The properties of adaptive walks in evolving populations of fungus. Plos Biol. 7: e1000250.

133. Shaaban, M., Palmer, J.M., El-Naggar, W.A., El-Sokkary, M.A., Habib, E.-S.E. & Keller, N.P. 2010 Involvement of transposon-like elements in penicillin gene cluster regulation. Fungal Genet. Biol. 47:423-432

134. Shimizu, M., Fujii, T., Masuo, S. & Takaya, N. 2010 Mechanism of de novo branched-chain amino acid synthesis as an alternative electron sink in hypoxic Aspergillus nidulans cells. Appl. Env. Microbiol. 76: 1507-1515

135. Shin, K.-S., Kwon, N.-J. & Yu, J.-H. 2009 Gbg-mediated growth and developmental control in Aspergillus fumigatus. Curr. Genet. 6: 631-641

136. Si, H., Justa-Schuch, D., Seiler, S. & Harris, S.D. 2010 Regulation of septum formation by the Bud3-Rho4 GTPase module in Aspergillus nidulans. Genetics 185:165-176

137. Siewers, V., Chen, X., Huang, L., Zhang, J. & Nielsen, J. 2009 Heterologous production of non-ribosomal peptide LLD-ACV in Saccharomyces cerevisiae. Metabol. Eng. 11: 391-397

138. Silva, E.M., Freitas, J.S., Gras, D.E., Squina, F.M., Leal, J., Silveira, H.C.S., Martinez-Rossi, N.M. & Rossi, A. 2008 Identification of genes differentially expressed in a strain of the mold Aspergillus nidulans carrying a loss-of-function mutation in the palA gene. Can. J. Microbiol. 54:803-311

139. Singhal, A. & Thakur, I.S. 2009 Decolourization and detoxification of pulp and paper mill effluent by Emericella nidulans var. nidulans. J. Hazardous Materials 171: 619-625

140. Skouri-Gargouri, H., Jellouli-Chaker, N. & Gargouri, A. 2010 factors affecting production and stability of the AcAFP antifungal peptide secreted by Aspergillus clavatus. Appl. Microbiol. Biotechnol. 86: 535-543

141. Sorentino, F., Roy, I. & Keshavarz, T. 2010 Impact of linoleic acid supplementation on lovastatin production in Aspergillus terreus cultures. Appl. Microbiol. Biotechnol. 88: 65-73

142. Szewczyk, E. & Krappmann, S. 2010 Conserved regulators of mating are essential for Aspergillus fumigatus cleistothecium formation. Eukaryot. Cell 9: 774-783

143. Tabuchi, S., Ito, J., Adachi, T., Ishida, H. & Hata, Y. 2009 Display of both N- and C-terminal target fusion proteins on the Aspergillus oryzae cell surface using a chitin-binding module. Appl. Microbiol. Biotechnol. 87: 1783-1789

144. Tada, S., Matsushita-Morita, M., Suzuki, S., Kusumoto, K.-I. & Kashiwagi, Y. 2009 Characterization of a neutral ceramidase orthologue from Aspergillus oryzae. FEMS Microbiol. Lett. 298: 157-165

145. Takaya, K., Higuchi, Y., Kitamoto, K. & Arioka, M. 2009 A cytosolic phospholipase A2-like protein in the filamentous fungus Aspergillus oryzae localizes to the intramembrane space of the mitochondria. FEMS Lett. 301: 201-209

146. Tao, L., Gao, N., Chen, S. & Yu, J.-H. 2010 The choC gene encoding a putative phospholipid methyltransferase is essential for growth and development in Aspergillus nidulans. Curr. Genet. 56: 283-296

147. Teves, F., Lamas-Maceiras, M., Garcia-Estrada, C., Casqueiro, J., Naranjo, L., Ullán, R.V., Scervino, J.-M., Wu, X., Velasco-Conde, T. & Martín, J.F. 2009 Transcriptional upregulation of four genes of the lysine biosynthetic pathway by homocitrate accumulation in Penicillium chrysogenum: homocitrate as a sensor of lysine-pathway distress. Microbiol. 155: 3881-3892

148. Tevz, G., Bencina, M. & Legisa, M. 2009 Enhancing itaconic acid production by Aspergillus terreus. Appl. Microbiol. Biotechnol. 87: 1657-1664

149. Thön, M., Al Abdallah, Q., Hortschansky, P., Scharf, D.H., Eisendle, M., Haas, H. & Brakhage, A.A. 2010 The CCAAT-binding complex coordinates the oxidative stress response in eukaryotes. Nucleic Acids Res. 38:1098-1113

150. Tisch, D. & Schmoll, M. 2009 light regulation of metabolic pathways in fungi. Appl. Microbiol. Biotechnol. 85: 1259-1277

151. Tribus, M., Bauer, I., Galehr, J., Rieser, G., Trojer, P., Brosch, G., Loidl, P., Haas, H., Graessle, S. 2010 A novel motif in fungal class 1 histone deacetylases is essential for growth and development of Aspergillus. Mol. Biol. Cell 21: 345-353

152. van den Berg, R.A., Braaksma, M., van der Veen, D., van der Werf, M.J., Punt, P.J., van der Oost, J. & de Graaf, L.H. 2010 Identification of modules in Aspergillus niger by gene co-expression network analysis. Fungal Genet. Biol. 47:539-550

153. Vangelatos, I., Roumelioti, K., Gournas, C., Suarez, T., Scazzocchio, C. & Sophianopoulou, V. 2010 Eisosome organization in the filamentous ascomycete Aspergillus nidulans. Eukaryot. Cell 9: 1441-1454

154. Vangelatos, I., Vlachakis, D., Sophianopoulou, V. & Diallinas, G. 2009 Modelling and mutational evidence identify the substrate binding site and functional elements in APC amino acid transporters. Mol. Memb. Biol. 26: 356-370

155. Vishwanatha, K.S, Rao, A.G.A. & Singh, S.A. 2010 Production and characterization of a milk-clotting enzyme from Aspergillus oryzae MTCC 5341. Appl. Microbiol. Biotechnol. 85: 1849-1859

156. Vongsangnak, W., Salazar, M., Hansen, K. & Nielsen, J. 2009 Genome-wide analysis of maltose utilization and regulation in aspergilli. Microbiol. 155: 3893-3902

157. Walker, L.A., Gow, N.A.R. & Munro, C.A. 2009 Fungal echinocandin resistance. Fungal Genet. Biol. 47:117-126

158. Wang, C.-L., Shim, W.-B. & Shaw, B.D. 2010 Aspergillus nidulans striatin (StrA) mediates sexual development and localizes to the endoplasmic reticulum. Fungal Genet. Biol. 47: 789-799

159. Wang, Y., Song, J.-Z., Yang, Q., Liu, Z.-H., Huang, X.-M. & Chen, Y. 2010 Cloning of a heat-stable chitin deacetylase gene from Aspergillus nidulans and its functional expression in Escherichia coli. Appl. Biochem. Biotechnol. 162: 843-854

160. Wilson, R.A. & Talbot, N.J. 2009 Fungal physiology -  a future perspective. Microbiol. 155: 3810-3815

161. Wohlleben, W., Subkowski, T., Bollschweiler, C., von Vacano, B., Liu, Y., Schrepp, W. & Baus, U. 2010 Recombinantly produced hydrophobins from fungal analogues as highly surface-active performance proteins. Eur. Biophys. J. 39: 457-468

162. Wölfle, S., Trienens, M. & Rohlfs, M. 2009 Experimental evolution of resistance against a competing fungus in Drosophila melanogaster. Oecologia 161: 781-790

163. Wong, K.H., Hynes, M.J., Todd, R.B. & Davis, M.A. 2009 Deletion and overexpression of the Aspergillus nidulans GATA factor AreB reveals unexpected pleiotropy. Microbiol. 155: 3868-3880

164. Wrobel, M., Lewandowska, I., Bronowicka-Adamska, P. & Paszewski, A. 2009 The level of sulfane sulfur in the fungus Aspergillus nidulans wild type and mutant strains. Amino Acids.  37: 565-571

165. Xiong, Y. & Oakley, B.R. 2009 In vivo analysis of the functions of g-tubulin-complex proteins. J. Cell Sci. 122: 4218-4227

166. Yoon, J., Aishan, T., Maruyama, J.-i. & Kitamoto, K. 2010 Enhanced production and secretion of heterologous proteins by the filamentous fungus Aspergillus oryzae via disruption of vacuolar protein sorting gene Aovps10. Appl. Env. Microbiol. 76: 5718-5727

167. Zekert, N., Veith, D. & Fischer, R. 2010 Interaction of the Aspergillus nidulans microtubule-organizing center (MTOC) component ApsB with gamma-tubulin and evidence for a role of a subclass of peroxisomes in the formation of septal MTOCs. Eukaryot. Cell 9: 795-805

168. Zhang, J., Li, S., Musa, S., Zhou, H. & Xiang, X. 2009 Dynein light intermediate chain in Aspergillus nidulans is essential for the interaction between heavy and intermediate chains. J. Biol. Chem. 284:34760-34768

169. Zhang, Z. & Townsend, J.P. 2009 The filamentous fungal gene expression database (FFGED). Fungal Genet. Biol. 47: 199-204

170. Zhao, X., Hume, S.L., Johnson, C., Thompson, P., Huang, J., Gray, J., Lamb, H.K. & Hawkins, A.R. 2010 The transcription repressor NmrA is subject to proteolysis by three Aspergillus nidulans proteases Protein Sci. 19: 1405-1419

 

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