This bibliography attempts to cover genetical and biochemical publications on Aspergillus nidulans and also includes selected references to related species and topics. I would be grateful for publication lists and reprints , especially for papers in books and less readily available periodicals. Entries have been checked as far as possible, but please tell me of any errors.
John Clutterbuck
1. Aleksenko, A.Y. & Clutterbuck, A.J. 1995 Recombinational stability of replicating plasmids in Aspergillus nidulans during transformation, vegetative growth and sexual reproduction. Curr. Genet. 28: 87-93.
2. Aleksenko, A. & Clutterbuck, A.J. 1996 The plasmid replicator AMA1 in Aspergillus nidulans is an inverted duplication of a low-copy-number dispersed genomic repeat. Mol. Microbiol. 19: 565-574.
3. Aleksenko, A., Gems, D. & Clutterbuck, J. 1996 Multiple copies of MATE elements support autonomous plasmid replication in Aspergillus nidulans. Mol. Microbiol. 20: 427-434.
4. Aleksenko, A.Y., Makarova, N.A., Nikolaev, I.V. & Clutterbuck, A.J. 1995 Integrative and replicative transformation of Penicillium canescens with a hetero-logous nitrate-reductase gene. Curr. Genet. 28: 474-477.
5. Allen, S.J. & Holbrook, J.J. 1995 Isolation, sequence and overexpression of the gene encoding NAD-dependent formate dehydrogenase from the methylotrophic yeast Candida methylica. Gene 162: 99-104.
6. Amutan, M., Nyyssönen, E., Stubbs, J., Diaz-Torres, M.R. & Dunn-Coleman, N. 1996 Identification and cloning of a mobile transposon from Aspergillus niger var. awamori. Curr. Genet. 29: 468-473.
7. Arisan-Atac, I., Wolschek, M. & Kubicek, C.P. 1996 Trehalose-6-phosphate synthase A affects citrate accumulation by Aspergillus niger under conditions of high glycolytic flux. FEMS Microbiol. Lett. 140: 77-83.
8. Arst, H.N.Jr. 1995 Nitrogen metabolite repression in Aspergillus nidulans: an historical perspective. Can. J. Bot. 73: (Suppl. 1) S148-S152.
9. Arst, H.N.Jr. & Sheerins, A. 1996 Translational initiation competence, 'leaky scanning' and translational reinitiation in areA mRNA of Aspergillus nidulans. Mol. Microbiol. 19: 1019-1024.
10. Bartling, S., van den Hombergh, J.P.T.W., Olsen, O., von Wettstein, D. & Visser, J. 1996 Expression of an Erwinia pectate lyase in three species of Aspergillus. Curr. Genet. 29: 474-481.
11. Barton, N.R. & Goldstein, L.S.B. 1996 Going mobile: Microtubule motors and chromosome segregation. Proc. Nat. Acad. U.S.A. 93: 1735-1742.
12. Bonnarme, P., Gillet, B., Sepulchre, A.M., Role, C., Beloeil, J.C. & Decrocq, C. 1995 Itaconate biosynthesis in Aspergillus terreus. J. Bacteriol. 177: 3573-3578.
13. Borges-Walmsley, M.I., Turner, G., Bailey, A.M., Brown, J., Lehmbeck, J. & Clausen, I.G. 1995 Isolation and characterisation of genes for sulphate activation and reduction in Aspergillus nidulans: implications for evolution of an allosteric control region by gene duplication. Mol. Gen. Genet. 247: 423-429.
14. Brakhage, A.A. & van den Brulle, J. 1995 Use of reporter genes to identify recessive trans-acting mutations specifically involved in the regulation of Aspergillus nidulans penicillin biosynthesis genes. J. Bacteriol. 177: 2781-2788.
15. Brandhorst, T., Dowd, P.F. & Kenealy, W.R. 1996 The ribosome-inactivating protein restrictocin deters insect feeding on Aspergillus restrictus. Microbiology 142: 1551-1556.
16. Brandhorst, T. & Kenealy, W.R. 1995 Effects of leader sequences upon the heterologous expression of restrictocin in Aspergillus nidulans and Aspergillus niger. Can. J. Microbiol. 41: 601-611.
17. Brown, D.W., Yu, J.-H., Kelkar, H.S., Fernandes, M., Nesbitt, T.C., Keller, N.P., Adams, T.H. & Leonard, T.J. 1996 Twenty-five coregulated transcripts define a sterigmatocystin gene cluster in Aspergillus nidulans. Proc. Nat. Acad. Sci. U.S.A. 93: 1418-1422.
18. Busby, T.M., Miller, K.Y. & Miller, B.L. 1996 Suppression and enhancement of the Aspergillus nidulans medusa mutation by altered dosage of the bristle and stunted genes. Genetics 143: 155-163.
19. Caddick, M., Archer, D., Assinder, S., Catcheside, D. & Clutterbuck, J. 1996 Meeting report: The filaments that bind us. Microbiology 142: 213-214.
20. Cardenas, M.E., Muir, R.S., Breuder, T. & Heitman, J. 1995 Targets of immunophilin-immunosuppressant complexes are distinct highly conserved regions of calcineurin A. EMBO J. 14: 2772-2783.
21. Cassart, J.P., Georis, I., Östling, J., Ronne, H. & Vandenhaute, J. 1995 The MIG1 repressor from Kluyveromyces lactis: Cloning, sequencing and functional analysis in Saccharomyces cerevisiae. FEBS-Lett. 371:191-194.
22. Castro-Prado, M.A.A. & Zucchi, T.M.A.D. 1996 A gene inactivatioin system (GIS) acting in meiosis of a duplicated strain of Aspergillus nidulans. Bras. J. Genet. 19: 17-25.
23. Chang, P.-K., Cary, J.W., Yu, J., Bhatnagar, D. & Cleveland, T.E. 1995 The Aspergillus parasiticus polyketide synthase gene pksA, a homolog of Aspergillus nidulans wA, is required for aflatoxin B1 biosynthesis. Mol. Gen. Genet. 248: 270-277.
24. Chiu, Y.H. & Morris, N.R. 1995 Extragenic suppressors of nudC3, a mutation that blocks nuclear migration in Aspergillus nidulans. Genetics 141: 453-464.
25. Chu, Y.-W., Renno, D. & Saunders, G. 1995 detection of a protein which binds specifically to the upstream region of the pcbAB gene in Penicillium chrysogenum. Curr. Genet. 28: 184--189.
26. Clement, D.J., Stanley, M.S., Attwell, N.A., Clipson, N.J.W., Fincham, D.A. & Hooley, P. 1996 Evidence for sltA1 as a salt-sensitive allele of the arginase gene (agaA ) in the ascomycete Aspergillus nidulans. Curr. Genet. 29: 462-467.
27. Collett, M.A., Bradshaw, R.E. & Scott, D.B. 1995 A mutualistic fungal symbiont of perennial ryegrass contains two different pyr4 genes, both expressing orotidine-5'-monophosphate decarboxylase. Gene 158: 31-39.
28. Crebelli, R., Andreoli, C., Carere, A., Conti, L., Crochi, B., Cotta-Ramusino, M. & Benigni, R. 1995 Toxicology of halogenated aliphatic hydrocarbons: Structural and molecular determinants for the disturbance of chromosome segregation and the induction of lipid peroxidation. Chemico-Biological-Interact. 98: 113-129.
29. Crous, J.M., Pretorius, I.S. & van Zyl, W.H. 1995 Cloning and expression of an Aspergillus kawachii endo-1,4- -xylanase gene in Saccharomyces cerevisiae. Curr. Genet. 28: 467-473.
30. De Bièvre, C. & Dujon, B. 1995 Organisation of the mitochondrial genome of Trichophyton rubrum. DNA sequence analysis of the ND4 gene, the ATPase subunit-6 gene, the ribosomal RNA small-subunit gene, the ND6 gene, the COXIII gene, the ATPase subunit-8 gene and six tRNA genes that correspond respectively to the tyrosine, lysine, glutamine, asparagine, isoleucine and tryptophan isoacceptors. Curr. Genet. 28: 553-559.
31. De Cal, A., Pascual, S., Larena, I. & Melgarejo, P. 1995 Biological control of Fusarium oxysporum f. sp. lycopersici. Plant Pathol. (Oxford) 44: 909-917.
32. Denison, S.H., Orejas, M. & Arst, H.N.Jr. 1995 Signaling of ambient pH in Aspergillus involves a cysteine protease. J. Biol. Chem. 270: 28519-28522.
33. DeVries, L., Mousli, M., Wurmser, A. & Farquhar, M.G. 1995 GAIP, a protein that specifically interacts with the trimeric G protein G i3, is a member of a protein family with a highly conserved core domain. Proc. Nat. Acad. Sci. U.S.A. 92: 11916-11920.
34. Diallinas, G., Gorfinkiel, L., Arst, H.N.Jr., Cecchetto, G. & Scazzocchio, C. 1995 Genetic and molecular characterization of a gene encoding a wide specificity purine permease of Aspergillus nidulans reveals a novel family of transporters conserved in prokaryotes and eukaryotes. J. Biol. Chem. 270: 8610-8622.
35. Donnelly, E., Barnett, Y.A. & McCullough, W. 1995 Quantification of DNA damage and repair in amino acid auxotrophs and UV-sensitive mutants of Aspergillus nidulans using an ELISA. FEBS Lett. 377: 118-122.
36. Esser, K. & Blaich, R. 1994 Heterogenic incompatibility in fungi. In Wessels, J.G.H. and Meinhardt, F. (Ed.). The Mycota, I: Growth, differentiation and sexuality. Springer-Verlag, Berlin, pp. 210-232.
37. Feng, G.H. & Leonard, T.J. 1995 Characterization of the polyketide synthase gene (pksL1) required for aflatoxin biosynthesis in Aspergillus parasitcus. J. Bacteriol. 177: 6246-6254.
38. Fernández-Cañón, J.M. & Peñalva, M.A. 1995 Fungal metabolic model for human type I hereditary tyrosinaemia. Proc. Nat. Acad. Sci. USA 92: 9132-9136.
39. Fernández-Cañón, J.M. & Peñalva, M.A. 1995 Molecular characterization of a gene encoding a homogentisate dioxygenase from Aspergillus nidulans and identification of its human and plant homologues. J. Biol. Chem. 270: 21199-21205.
40. Fierro, F., Barredo, J.L., Díez, B., Gutierrez, S., Fernández, F.J. & Martín, J.F. 1995 the penicillin gene cluster is amplified in tandem repeats linked by conserved hexanuclotide sequences. Proc. Nat. Acad. Sci. U.S.A. 92: 6200-6204.
41. Fierro, F., Kosalková, K., Gutiérrez, S. & Martín, J. 1996 Autonomously replicating plasmids carryig the AMA1 region in Penicillium chrysogenum. Curr. Genet. 29: 482-489.
42. Fierro, F., Montenegro, E., Gutiérrez, S. & Martín, J.F. 1996 Mutants blocked in penicillin biosynthesis show a deletion of the entire gene cluster at a specific site within a conserved hexanucleotide sequence. Appl. Microbiol. Biotechnol. 44: 597-604.
43. Fillinger, S. & Felenbok, B. 1996 A newly identified gene cluster in Aspergillus nidulans comprises five novel genes localized in the alc region that are controlled both by the specific transactivator AlcR and the carbon-catabolite repressor CreA. Mol. Microbiol. 20: 475-488.
44. Fillinger, S., Panozza, C., Mathieu, M. & Felenbok, B. 1995 The basal level of transcription of the alc genes in the ethanol regulon in Aspergillus nidulans is controlled by the specific transactivator AlcR and the general carbon catabolite repressor CreA. FEBS Lett. 368: 547-550.
45. Fischer, M., Durand, R. & Fèvre, M. 1995 Characterization of the "promoter region" of the enolase-encoding gene enol from the anaerobic fungus Neocallimastix frontalis: Sequence and promoter analysis. Curr. Genet. 28: 80-86.
46. Fogarty, W.M. 1994 Enzymes of the genus Aspergillus. In Aspergillus. Biotechnology Handbooks 7, ed. Smith, J.E., Plenum Press, New York & London, pp. 177-218.
47. Fontz, K.R., Wolushok, C.P. & Payne, G.A. 1995 Cloning and assignment of linkage group loci to a karyotypic map of the filamentous fungus Aspergillus flavus. Mycologia 87: 787-794.
48. Fry, A.M., Schultz, S.J., Bartek, J. & Nigg, E.A. 1995 Substrate specificity and cell cycle regulation of the Nek2 protein kinase, a potential human homolog of the mitotic regulatory NIMA of Aspergillus nidulans. J. Biol. Chem. 270: 12899-12905.
49. Geiser, D.M., Arnold, M.L. & Timberlake, W.E. 1996 Wild chromosomal variants in Aspergillus nidulans. Curr. Genet. 29: 293-300.
50. Gervais, P. & Bensoussan, M. 1994 Solid state fermentaion of the genus Aspergillus. In Aspergillus. Biotechnology Handbooks 7, ed. Smith, J.E., Plenum Press, New York & London, pp. 101-140.
51. Gibbons, I.R. 1995 Dynein family of motor proteins: Present status and future questions. Cell Motility Cytoskel. 32: 136-144.
52. Glass, N.L. & Donaldson, G.C. 1995 Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl. Env. Microbiol. 61: 1323-1330.
53. Glayzer, D.C., Roberts, I.N., Archer, D.B. & Oliver, R.P. 1995 The isolation of Ant1, a transposable element from Aspergillus niger. Mol. Gen. Genet. 249: 432-438.
54. Goodrich-Tanrikulu, M., Mahoney, N.E. & Rodrigues, S.B. 1995 The plant growth regulator methyl jasmonate inhibits aflatoxin production by Aspergillus flavus. Microbiology 141: 2831-2837.
55. Haas, H. & Marzluf. G.A. 1995 NRE, the major nitrogen regulatory protein of Penicillium chrysogenum, binds specifically to elements in the intergenic promoter regions of nitrate assimilation and penicillin biosynthetic gene clusters. Curr. Genet. 28: 177-183.
56. Harris, S.D. & Hamer, J.E. 1995 SepB: an Aspergillus nidulans gene involved in chromosome segregation and the initiation of cytokinesis. EMBO J. 14: 5244-5257.
57. Harvey, W.M. & McNeill, B. 1994 Liquid fermentation systems and product recovery of Aspergillus. In Aspergillus. Biotechnology Handbooks 7, ed. Smith, J.E., Plenum Press, New York & London, pp. 141-176.
58. Hintz, W.E., Kalsner, I., Plawinski, E., Guo, Z. & Lagosky, P.A. 1995 Improved gene expression in Aspergillus nidulans. Can. J. Bot, 73 suppl 1: s876-s884.
59. Hegh, I., Patkar, S., Halkier, T. & Hansen, M.T. 1995 Two lipases from Candida antarctica: cloning and expression in Aspergillus oryzae. Can. J. Bot. 73 Supp l: S869-875.
60. Holt, C.L. & May, G.S. 1996 An extragenic suppressor of the mitosis-defective bimD6 mutation of Aspergillus nidulans codes for a chromosome scaffold protein. Genetics 142: 777-787.
61. Horn, B.W. & Greene, R.L. 1995 Vegetative compatibility within populations of Aspergillus flavus, A. parasiticus and A. tamarii from a peanut field. Mycologia 87: 324-332.
63. Huang, K.-X., Fujii, I., Ebizuka, Y., Gomi, K. & Sankawa, U. 1995 Molecular cloning and heterologous expression of the gene encoding dihydrogeodin oxidase, a multicopper blue enzyme from Aspergillus terreus. J. Biol. Chem. 270: 21495-21502.
64. Huang, K.-x., Iwakami, N., Fujii, I., Ebizuka, Y. & Sankawa, U. 1995 Transformations of Penicillium islandicum and Penicillium frequentans that produce anthroquinone-related compounds. Curr. Genet. 28: 580-584.
65. Hunter, G.D., Jones, I.G. & Sealy-Lewis, H.M. 1996 The cloning and sequencing of the alcB gene, coding for alcohol dehydrogenase II, in Aspergillus nidulans. Curr. Genet. 29: 122-129.
66. Hur, M. & Waring, R.B. 1995 Two group I introns with a C G basepair at the 5' splice-site instead of the very highly conserved U G basepair: is selection post-translational? Nucleic Acids Res. 23: 4466-4470.
67. Itoh, Y. & Scott, B. 1994 Heterologous and homologous plasmid integration at a spore-pigment locus in Penicillium paxilli generates large deletions. Curr. Genet. 26: 469-476.
68. Itoh, Y., Johnson, R. & Scott, B. 1994 Integrative transformation of the mycotoxin-producing fungus Penicillium paxilli. Curr. Genet. 25: 508-513.
69. Iwanejko, L., Cotton, C., Jones, G., Tomsett, B. & Strike, P. 1996 nuvA, an Aspergillus nidulans gene involved in DNA repair and recombination, is a homologue of Saccharomyces cerevisiae RAD18 and Neurospora crassa uvs-2. Microbiol. 142: 505-515.
70. James, S.W., Mirabito, P.M., Scacheri, P.C. & Morris, N.R. 1995 The Aspergillus nidulans bimE (blocked-in-mitosis) gene encodes multiple cell cycle functions involved in mitotic checkpoint control and mitosis. J. Cell Sci. 108: 3485-3499.
71. Kalsner, I., Hintz, W., Reid, L.S. & Schachter, H. 1995 Insertion into Aspergillus nidulans of functional UDP-GlcNAc: 3-D-mannoside -1,2-N-acetylglucosaminyl-transferase I, the enzyme catalysing the first committed step from oligomannose to hybrid and complex N-glycans. Glycoconjugate J. 12: 360-370.
72. Katz, M.E., Flynn, P.K., vanKuyk, P.A. & Cheetham, B.F. 1996 Mutations affecting extracellular protease production in the filamentous fungus Aspergillus nidulans. Mol. Gen. Genet. 250: 715-724.
73. Keller, N.P., Segner, S., Bhatnagar, D. & Adams, T.H. 1995 stcS, a putative P-450 monooxygenase, is required for the conversion of versicolorin A to sterigmatocystin in Aspergillus nidulans. Appl. Env. Microbiol. 61: 3628-3632.
74. Kersten, P.J., Witek, C., Vanden-Wymelenberg, A. & Cullen, D. 1995 Phanerochaete chrysosporium glyoxal oxidase is encoded by two allelic variants: structure, genomic organization, and heterologous expression of glx1 and glx2. J. Bacteriol. 177: 6106-6110.
75. Khurana, N., Saxena, R.K., Gupta, R. & Rajan, M.V. 1996 Polyamines as modulators of microcycle conidiation in Aspergillus flavus. Microbiology 142: 517-523.
76. Kinghorn, J.R. & Unkles, S.E. 1994 Molecular genetics and expresion of foreign proteins in the genus Aspergillus. In Aspergillus. Biotechnology Handbooks 7, ed. Smith, J.E., Plenum Press, New York & London, pp. 65-100.
77. Klich, M.A., Yu, J., Chang, P.K., Bhatnagar, D. & Cleveland, T.E. 1995 Hybridization of genes involved in aflatoxin biosynthesis to DNA of aflatoxigenic and non-aflatoxigenic Aspergilli. Appl. Microbiol. Biotechnol. 44: 439-443.
78. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1251: Aspergillus flavus . Mycopathologia 132: 43-44.
79. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1252: Aspergillus fumigatus Mycopathologia 132: 45-46.
80. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1253: Aspergillus terreus. Mycopathologia 132: 49-50.
81. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1254: Emericella nidulans. Mycopathologia 132: 49-50.
82. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1255: Eurotium repens Mycopathologia 132: 51-52.
83. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1256: Eurotium rubrum. Mycopathologia 132: 53-54.
84. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1257: Penicillium chrysogenum. Mycopathologia 132: 55-56.
85. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1258: Penicillium expansum. Mycopathologia 132: 57-58.
86. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1259: Penicillium griseofulvum. Mycopathologia 132: 59-60.
87. Kozakiewicz, Z. 1995 IMI descriptions of fungi and bacteria no. 1260: Penicillium hirsutum. Mycopathologia 132: 61-62.
88. Kozakiewicz, Z. & Smith, O. 1994 Physiology of Aspergillus.. In Aspergillus. Biotechnology Handbooks 7, ed. Smith, J.E., Plenum Press, New York & London, pp. 23-40.
89. Kratzer, S. & Schüller, H.J. 1995 Carbon source-dependent regulation of the acetyl-coenzyme A synthetase-encoding gene ACS1 from Saccharomyces cerevisiae. Gene 161: 75-79.
90. Krell, T., Pitt, A.R. & Coggins, J.R. 1995 The use of electrospray mass spectrometry to identify an essential arginine residue in type II dehydroquinases. FEBS Lett. 360: 93-96.
91. Kumar, S. & Ramon, D. 1996 Purification and regulation of the synthesis of a -xylosidase from Aspergillus nidulans. FEMS Microbiol. Lett. 135: 287-293.
92. Lamb, H.K., Moore, J.D., Lakey, J.H., Levett, L.J., Wheeler, K.A., Lago, H., Coggins, J.R. & Hawkins, A.R. 1996 Comparative analysis of the QUTR transcription repressor protein and the three C-terminal domains of the pentafunctional AROM enzyme. Biochem. J. 313: 941-950.
93. Lamb, H.K., Newton, G.H., Levett, L.J., Cairns, E., Roberts, C.F. & Hawkins, A.R. 1996 The QUTA activator and QUTR repressor proteins of Aspergillus nidulans interact to regulate transcription of the quinate utilization pathways genes. Microbiology 142: 1477-1490.
94. Langdon, T., Sheerins, A., Ravagnani, A., Gielkens, M., Caddick, M.X. & Arst, H.N.Jr. 1995 Mutational analysis reveals dispensability of the N-terminal region of the Aspergillus transcription factor mediating nitrogen metabolite repression. Mol. Microbiol. 17: 877-888.
95. Lee, B.N. & Adams, T.H. 1996 fluG and flbA function interdependently to initiate conidiophore development in Aspergillus nidulans through brlA activation. EMBO J. 15: 299-309.
96. Lee, D.W., Lee, S.H., Hwang, H.-A., Kim, J.H. & Chae, K.S. 1996 Quantitative analysis of gene expression in sexual structures of Aspergillus nidulans by sequencing of 3'-directed cDNA clones. FEMS Microbiol. Lett. 138: 71-76.
97. Lee, J.H., Kwon, K.-S. & Han, C.Y. 1996 Regulation of -galactosidase biosynthesis in Aspergillus nidulans. FEMS Miocrobiol. Lett. 135: 79-84.
98. Lee, Y.C., Lee, B.J. & Kang, H.S. 1996 The RNA component of mitochondrial ribonuclease P from Aspergillus nidulans. Eur. J. Biochem. 235: 297-303.
99. Lee, Y.C., Lee, B.J., Hwang, D.S. & Kang, H.S. 1996 Purification and characterization of mitochondrial ribonuclease P from Aspergillus nidulans. Eur. J. Biochem. 235: 289-296.
100. Levesley, I., Newton, G.H., Lamb, H.K., van Schothorst, E., Dalgleish, R.W.M., Samson, A.C.R., Roberts, C.F. & Hawkins, A.R. 1996 Domain structure and function within the QUTA protein of Aspergillus nidulans: implications for the control of transcription. Microbiology 142: 87-98.
101. Lewis, C. & Champe, S.P. 1995 A pre-induction sporulation gene from Aspergillus nidulans. Microbiology 141: 1821-1828.
102. Lewis, C.W., Anderson, J.G. & Smith, J.E. 1994 Health related aspects of the genus Aspergillus. In Aspergillus. Biotechnology Handbooks 7, ed. Smith, J.E., Plenum Press, New York & London, pp. 219-261.
103. Li Calzi, M., Raviolo, C., Ghibaudi, E., De Gioia, L., Salmona, M., Cazzaniga, G., Kurosaki, M., Terao, M. & Garattini, E. 1995 Purification, cDNA cloning, and tissue distribution of bovine liver aldehyde oxidase. J. Biol. Chem. 270: 31037-31045.
104. Litzka, O., Then-Bergh, K. & Brakhage, A.A. 1995 Analysis of the regulation of the Aspergillus nidulans penicillin biosynthesis gene aat (penDE), which encodes acyl coenzyme A:6-aminopenicillanic acid acyltransferase. Mol. Gen. Genet. 249: 557-569.
105. López-Medrano, R., Ovejero, M.C., Calera, J.A., Puente-P. & Leal, F. 1995 Aspergillus fumigatus antigens. Microbiology 141: 2699-2704.
106. Lu, K.P. & Hunter, T. 1995 Evidence for a NIMA-like mitotic pathway in vertebrate cells. Cell 81: 413-424.
107. Luengo, J.M. 1995 Enzymatic synthesis of hydrophobic penicillins. J. Antibiotics (Tokyo) 48: 1195-1212.
108. Luo, X. 1995 Cloning and characterization of three Aspergillus niger promoters. Gene 163: 127-131.
109. MacCabe, A.P., van den Hombergh, J.P.T.W., Tilburn, J., Arst, H.N.Jr. & Visser, J. 1996 Identification, cloning and analysis of the Aspergillus niger gene pacC, a wide domain regulatory gene responsive to ambient pH. Mol.. Gen. Genet. 250: 367-374.
110. Maccheroni, W.Jr., Martinez-Rossi, N.M. & Rossi, A. 1995 Does gene palB regulate the transcription or the post-translational modification of Pi-repressible phosphatases of Aspergillus nidulans? Brazil. J. Med. Biol. Res. 28: 31-38.
111. Mach, R.L., Seiboth, B., Myasnikov, A., Gonzalez, R., Strauss, J., Harkki, A.M. & Kubicek, C.P. 1995 The bgl1 gene of Trichoderma reesei QM 9414 encodes an extracellular, cellulose-inducible -glucosidase involved in cellulase induction by sophorose. Mol. Microbiol. 16: 687-697.
112. Mallado, E., Aufauvre-Brown, A., Gow, N.A.R. & Holden, D.W. 1996 The Aspergillus fumigatus chsC and chsG genes encode class III chitin synthases with different functions. Mol. Microbiol. 20: 667-679.
113. Marx, F., Haas, H., Hofer, S., Stöffler, G. & Redl, B. 1995 Sequence and structure of Penicillium chrysogenum phoG, homologous to an acid phosphatase-encoding gene of Aspergillus nidulans. Gene 160: 137-138.
114. Matheucci, E.Jr., Henrique-Silva, F., El-Gogary, S., Rossini, C.H.B., Leite, A., Vera, J.E., Urioste, J.C.C., Crivellaro, O. & El-Dorry H. 1995 Structure, organization and promoter expression of the actin-encoding gene in Trichoderma reesei. Gene 161: 103-106.
115. Mernitz, G., Koch, A., Henrissat, B. & Schultz, G. 1996 Endoglucanase II (EGII) of Penicillium janthinellum: cDNA sequence, heterologous expression and promoter analysis. Curr. Genet. 29: 490-495.
116. Mizuki, M., Chikuba, K. & Tanaka, K. 1994 A case of chronic necrotizing pulmonary aspergillosis due to Aspergillus nidulans. Mycopathol. 128: 75-79.
117. Momany, M., Morrell, J.L., Harris, S.D. & Hamer, J.E. 1995 Septum formation in Aspergillus nidulans. Can. J. Bot. 73 (Suppl 1): S396-S399.
118. Morawetz, R., Lendenfeld, T., Mischak, H., Mühlbauer, M., Gruber, F., Goodnight, J., de Graaf, L.H. & Visser, J. 1996 Cloning and characterisation of genes (pkc1 and pkcA) encoding protein kinase C homologues from Trichoderma reesei and Aspergillus niger. Mol. Gen. Genet. 250: 17-28.
119. Morris, N.R., Xiang, X. & Beckwith, S.M. 1995 Nuclear migration advances in fungi. Trends Cell Biol. 5: 278-282.
120. Navarro, R.E., Stringer, M.A., Hansberg, W., Timberlake, W.E. & Aguirre. J. 1995 catA, a new Aspergillus nidulans gene encoding a developmentally regulated catalase. Curr. Genet. 29: 352-359.
121. Navarro-Bordonaba, J. & Adams, T.H. 1994 Development of conidia and fruiting bodies in Ascomycetes. In Wessels, J.G.H. and Meinhardt, F. (Ed.). The Mycota, I: Growth, differentiation and sexuality. Springer-Verlag, Berlin, pp. 333-349.
122. Oakley, B.R. 1995 -Tubulin and the fungal microtubule cytoskeleton. Can. J. Bot. 73 (Suppl. 1) S352-S358.
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Tazebay, U.H. 152
Terao, M. 103
Téren, J. 161
Then-Bergh, K. 104
Tilburn, J. 109 124 139
Timberlake, W.E. 49 120 170
Tiwary, B.N. 146
Tollervey, D. 127
Tomsett, B. 69
Trail, F. 153
Trinci, A.P.J. 154 165
Tsukagoshi, N. 174
Turner, G. 13 165
Ulbrich, N. 167
Unkles, S.E. 76 155
Urioste, J.C.C. 114
Ushijima, S. 156
van de Rhee, M.D. 158
van de Vondervoort, P.J.I. 157
van den Broek, J.M. 160
van den Brulle, J. 14
Vandenhaute, J. 21
van den Hombergh, J.P.T.W. 10 109 157
van den Hondel, C.A.M.J.J. 130
van den Hurk, P. 162
Vanden-Wymelenberg, A. 74
van der Heijden, N.C.B.A. 157
van der Veen, P. 159
van Gorcom, R.F.M. 160
van Kan, J.A.L. 160
vanKuyk, P.A. 72
van Nistelrooy, J.G.M. 160
van Schothorst, E. 100
van Zyl, W.H. 29
Varga, J. 161
Vera, J.E. 114
Verweij, P.E. 162
Vierula, J. 129
Visser, J. 10 109 118 157 159 166
von Wettstein, D. 10
Wang, Y. 170
Ward, M.P. 163
Waring, R.B. 66
Wessels, J.G.H. 144
Wheeler, K.A. 92
Wiebe, M.G. 154 165
Willins, D.A. 164
Witek, C. 74
Withers, J.M. 165
Witteveen, C.F.B. 166
Wnendt, S. 167
Wolschek, M. 7 148
Wolushok, C.P. 47
Wu, L. 129
Wurmser, A. 33
Xiang, X. 119 164 168 169
Xin, M. 168
Xiong, M. 170
Xu, G. 129 171
Ye, X.S. 129 171
Yoon, J.H. 172
Yoon, Y. 173
Yoshino, S. 174
Yu, J. 23 77 175
Yu, J.-H. 17 176 177
Zeilinger, S. 148
Zoll, J. 162
Zucchi, T.M.A.D. 22
Acetyl coA synthetase 89
Actin 114
Active site 90
Adaptation to antifungal agents 125
Aflatoxin biosynthesis 23 37 54 77 153 175 177
Alcohol dehydrogenases 65 142
Alcohol regulation 43 44
Aldehyde oxidase 103
Alkaptanuria 39c
Allostery evolution 13
AMA1 element 1 2 3 4 41
Amphotericin B adaptation 125
Anaerobic stress 142
ANS1 element 3
Ant1 transposable element
Anthoquinone-related compounds 64
Antifungals 125 145 167
Antigens 105
Arabinose induction 91
Arginase 26
Arginine residue at active site 90
Aspergillosis 102 116
Autolysis 97
Autonomously replicating plasmid 1 2 3 4 41
B-chromosome 49
[[beta]]-galactosidase 97
[[beta]]-glucosidase 111
Biological control 31
Calcineurin 20
Calpain 32
Carbon regulation 21 43 58 89 91 97 115 140 148 159 174
Catalase 120
cDNAs in sexual reproduction 96
Cell cycle 19 48 56 60 70 106 129 171
Cell walls 143 144
Cellulose induction 115
Cephalosporin biosynthesis 151
Chemostat culture 165
Chitin Synthases 112
Chromosome scaffold 60
Chromosome segregation 11 28 56
Cinnamon oil 145
Citrate accumulation 7
Cleistothecia 96 121
Conidia 152
Conidiation 18 33 75 95 101 120 121 163 168
Contig map 170
Copper proteins 63
Copy-number dependent regulation 93
Cotransformation 137
Cysteine protease 32
Cytochrome C oxidase 66
Cytokinesis 56 117
Dehydroquinases 90
Developmental regulation 16
Dihydrogeodin oxidase 63
DNA damage detection 35
DNA methylation 19 22
DNA repair 69 172
Dominant negative mutants 106
Dynein 51 164 169
Eburicol demethylase 160
Electrophoretic karyotype 47 49
Electrospray mass spectrometry 90
ELISA for single stranded DNA 35
Endoglucanase 115
Endoxylanase 29
Enhancement of medA 18
Enolase 45
Enzymes, industrial 46
Ethanol utilization 43 142
Extracellular proteases 72
Extracellular protein 16
Fermentation 50 57 165
Fluffy morphology mutants 95
Fluorescent antibody localization 169
Formate dehydrogenase 5
Fumarylacetate hydrolase 38
Fungicide resistance 160
Fungitoxicant 125 145 167
G-proteins 33
Gene amplification 40
Gene clusters 17 19 43 176
Gene dosage 18
Gene duplication 13
Gene inactivation 22
Genome structure and function 19
GIS (gene inactivation system) 22
Glycerol accumulation 134 166
Glycosylation 58 71 105
Glyoxal oxidase 74
Halogenated hydrocarbons 28
Health 102
Heterokaryon incompatibility 36 61
Heterologous gene expression 71 74 76 165
Heterologous promoters 158
Histone genes 52
Homogentisate dioxygenase 38 39
Hyphal growth 144 154
Hyphal walls 143 144
Industrial enzymes 46
Industrial fermentation 50 57 165
Industrial gene expression 76 165
Industrial strain improvement 156
Insect repellent toxin 15
Insertional mutation 6 53
Interspecific diploids 161
Introns 52 66
Iron-binding residues 151
Itaconate biosynthesis 12
Ketonazole adaptation 125
Leader sequences 16
Leaky scanning 9
Light and development 19
Linkage groups 47
Lipases 59
Lipid peroxidation 28
Lytic enzymes in biological control 31
Mannitol in conidia 166
MATE element 2 3
Mating types 19
Melanin biosynthesis 150
Metal-affinity chromatography 132
Metallopretoeinases 131
Methyl jasmonate 54
Miconazole adaptation 125
Microcycle conidiation 75
Microtubules 11 164 173
MIP (methylation induced premeiotically) 22
Mitochondrial genome 30c
Mitochondrial ribonuclease 98 99
Mitosis 70
Mitotic spindle 60
Messenger RNA stability 127
Mutational plasmid insertion 67 111
Mutational transposon insertion 6 53
Mycotoxins 17 23 37 54 68 73 77 153 175 176 177
N-glycans 71
Neuronal migration 168
Nitrate reductase cluster 55 130
Nitrate uptake 136 155
Nitrate regulation 130
Nitrogen regulation 8 34 55 94 127 128 130 152
Nuclear migration 24 119 164 168 169
Oligohistidine fusion proteins 132
Osmosensitive arginase 26
Osmotic stress 133 134
P-450 monooxygenase 73
P-450-inhibiting fungicides 160
Parasexual interspecific mapping 161
Pathogenicity 102 105 112 116 145
PCR surveys 52
Peanut field 61
Pectate lyase 10
Penicillin biosynthesis 14 25 40 42 55 104 107 126 135 149 151
pH regulation 19 32 109 110 124 139 149
Phe-tRNA 146
Phenylalanine catabolism 39
Phosphatase 113 139
Physical map 170
Physiology 88
Plant growth regulator 54
Plasmid insertion mutation 111
Plasmid replication 2 3
Polyamines 75
Polyketide synthesis 23 37 150
Polymorphism 52 61
Polyols 159 166
Population genetics 49 61
Postreplication repair 172
Post-transcriptional protein modification 110
Proline transport 152
Promoter analysis 25 45 55 108 130 115 149
Promoter for heterologous gene expression 58
Promoter trapping 108
Proteases 72 131 139 157
Protein domains, structure 90 100 127 135 151
Protein kinases 48 118 129 163
Protein purification 132
Protein sequence evolution 92
Proteolysis in signal pathway 32 124
Purine uptake and metabolism 34 123
Pyrimidine biosynthesis 27
Quantitative structure-activity relationships 28
Quinate regulation 93 100
RAPD markers 161
Recombination iafter transformation 1
Recombination and repair 19 69
Regulation: see alcohol, allostery, arabinose, carbon, cellulose, development, nitrogen, penicillin biosynthesis, pH, purine metabolism, quinate, secondary metabolism, sophorose, sulphur, transcription factors
Regulator proteins 93 94 123 127
Replicating plasmid 1 2 3 4
Reporter gene fusions 126 165
Restrictocin 15 16
Ribonuclease P 98 99
Ribosomal proteins 133
Ribsosome inactivating protein 15 16
RIP (Repeat-induced point mutations) 22
mRNA stability 127
18sRNA comparisons 162
tRNA synthetase purification 146
Salt sensitive arginase 26
Salt stress 133 134
Secondary metabolism 7 12 63 64 104 126
Septins 117
Septum formation 117
Sexual reproduction 96 168
Signal peptides 10
Signal transduction 32 124 163
Site specific recombination 40 42
Sophorose induction 111
Sterigmatocystin 17 73 176
Sulphur regulation 13
Suppressors 18 24 60 73 139 164
Taste 136
Taxonomy 78-87 138 162
Temperature sensitivity 101 129
Toxic protein excretion 16
Transcription factors 44 123 124 127 128 149
Transformant stability 165
Transformation 67 68
Transformation: replicating plasmids 1 2 3 4 41
Transformation-induced deletions 67
Transformation-induced recombination 1
Translation initiation 9
Translocation in wild strain 49
Transposable elements 2 6 19 53
Transposon mutation 6 53
Trehalose-6-phosphate synthase 7
Trimeric G-proteins 33
tRNA synthetase purification 146
Tubulins 52 122 164 173
Tyrosinaemia model 38
Ubiquitin-extension protein 133
Ultraviolet sensitivity 35 172
Uric acid regulation 34
Vadar transposon 6
Versicolorin monooxygenase 73
Wild chromosomal variants 49
X-ray diffraction studies 135
Xanthine dehydrogenase 103
Xylanases 174
Xylosidase 91
A. awamori 6 10e
A. flavus 47 54 61 77 78 131 153 162 175 177eh
A. fumigatus 79 105 112 131
A. giganteus 167
A. kawachii 29s
A. niger 7 10e 14e 16e 53 108 109se 118c 125 141 157 160h 162 166
A. niger var. awamori 6 10e
A. oryzae 59e 77
A. parasiticus 23s 37s 61 77 153 175
A. quadrilineatus 161
A. restrictus 15 16h
A. sojae 77
A. tamarii 61 77
A. terreus 12 63 80 162
A. tetrazonus 161
Acremonium chrysogenum 41 151
Acremonium sp. 27
Agaricus bisporus 158t
Candida antarctica 59s
C. methylica 5e
Cephalosporium acremonium 41 151
Chaetomium gracile 174e
Colletotrichum lagenarum 150
Erwinia carotovora 10e
Eurotium repens 82
E. rubrum 83 162
Fusarium oxysporium 31
Kluyveromyces lactis 21c
Monascus purpureus 162
Neocallimastix frontalis 45h
Neurospora crassa 69c 129s 172c
Paecilomyces varialli 162
Penicillium canescens 4
P. chrysogenum 25 40 41 42 55 84 107 113 162 165
P. expansum 85
P. frequentans 64
P. griseofulvum 86
P. hirsutum 87
P. islandicum 64
P. italicum 160
P. janthinellum 115
P. mareffei 162
P. oxalicum 31
P. paxilli 67 68
Phanerochaete chrysosporium 74e
Rynchosporium secalis 137t
Saccharomyces cerevisiae 21h 29h 69c 89c 163c 172c
Saprolegnia monoica 45h
Trichoderma reesei 111 114 118 148
Trichophyton rubrum 30c
Ustillago maydis 147
Drosophila 136c
E. coli 132h 135h 141h
Hela cells 106h
Homo sapiens 20c 38c 39c 48c 168c
Mus 71e 136
Bos 103c
Xenopus 106h
acoB 101s
actA 114c
acvA 14e
aflR 17
agaA 26
alcA 44 58 142
alcB 65s 142
alcPROAMSU 43 142
alcR 44 142
aldA 44
AMA1 element 1 2 41
amdS 111t
ANS1 element 3
areA 8 9 94 127 128
argB 35
aromA 92c
aspA-C 117
benA 173
bimD6 suppressors 60
bimE 70
brlA 18
catA 120
cnaA 20c
creA 21c 97 140 148c 159
crnA 136c 155
facA 89c
fahA 38s
flbA 33c 95
fluG 95
gatA 147c
hmgA 38 39s
hxA 103c123
ipnA 14e
MATE element 2 3
medA 18
methG 35
mipA 122
[MRP1] 98s
niaD 4t 130
niiA 130
nimA 48c 106c 129c
nud 119 164
nudA 51 169
nudC 24
nudF 24 168s
nuvA 69s 172s
[oxiA] 66
pacA 139s
pacC 124 149
pacG 113c
pacM 139
palB 32s 110
palC 32
penDE 104
pksST 176s
prnB 142
prtA 139s
qutA 93 100
qutE 90
qutR 92c 93
sA 13s
sC 13s
sep 117
sepB 56
sltA 26
sncA-I 24
snf 164
stcA-W 17
stcS 73s
stuA 18 163c
suAfah 38 39s
sudA 60s
sudB,C 60
tubA 164 173
uapA 123
uapC 34s
uaY 123
uaZ 123
uvs 35
uvsH 69s 172s
verA 17
verB 73s
wA 23c 150c 176c
xprE,F,G 72
aflK 47
aflR 77 177eh
Antifungal protein gene 167s
benA 47
chsC 112s
chsG 112s
Dihydrogeodin oxidase gene 63eh
maoN 141s
mep20 131s
omtA 77 175s
pacC 109se
phoG 113s
pkcA 118c
pksA 23s
pksL1 37s
prtA-G 157
pyrG 47
rDNA 47
xynC 29s
Actin gene 114
ben 64t
bgl1 111
brs 67
cgxA,B 174e
egl2 115s
enol 45e
glx1,2 74e
ilpA,B 59se
Mitochondrial genes 30c
nim1 129s
pcbAB 25 149 151
pcbC 149
pkc1 118
PL3 10e
pyrG 27h
RAD18 69c 172
ugatA 147e
uvs-2 69c 172c
Alkaptanuria gene 39c
Bcg 136c
hph 64t 66t 137t 158t
GnTI 71e
LIS-1 168c
Nek2 48c
cSequence comparison
eExpression of heterologous genes in Aspergillus
hHeterologous expression of Aspergillus genes in other organisms
sSequence or cloning
tTransformation or selective marker
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Last modified 7/25/96 KMC