This bibliography attempts to cover genetical and biochemical publications on Aspergillus nidulans and also includes selected references to related species and topics. I would be grateful for publication lists and reprints , especially for papers in books and less readily available periodicals. Entries have been checked as far as possible, but please tell me of any errors. Authors are kindly requested to send a copy of each article to the FGSC for its reprint collection.

A. John Clutterbuck, Institute of Biomedical and Life Sciences, Anderson College, University of Glasgow, Glasgow G11 6NU Scotland, UK

1. Abarca, M^a.L. 2000 Taxonomia e identificacion de especies implicadas en la aspergillosis nosocomial. (Taxonomy and identification of the species involved in nosocomial aspergillosis.) Rev. Iberoam. Micol. 17: S79-S84

2. Abdallah, B.M., Simoes, T., Fernandes, A.R., Strauss, J., Seiboth, B., Sa-Correia, I. & Kubicek, C.P. 2000 Glucose does not activate the plasma-membrane-bound H⁺-ATPase but affects pmaA transcript abundance in Aspergillus nidulans. Arch. Microbiol. 174: 340-345

3. Agger, T. & Nielsen, J. 1999 Genetically structured modeling of protein production in filamentous fungi. Biotechnol. Bioeng. 66: 164-170

5. Ahn, C. & Morris, N.R. 2001 NUDF, a fungal homolog of the human LIS1 protein, functions as a dimer in vivo. J. Biol. Chem. 276: 9903-9909

6. Aleksenko, A., Nielsen, M.L. & Clutterbuck, A.J. 2001 Genetic and physical mapping of two centromere-proximal regions of chromosome IV in Aspergillus nidulans. Fungal Genet. Biol. 32: 45-54

7. Amor, C., Domínguez, A.I., De Lucas, J.R. & Laborda, F. 2000 The catabolite inactivation of Aspergillus nidulans isocitrate lyase occurs by specific autophagy of peroxisomes. Arch. Microbiol. 174: 59-66

8. Amrani, L., Primus, J., Glatigny, A., Arcangeli, L., Scazzocchio, C. & Finnerty, V. 2000 Comparison of the sequences of the Aspergillus nidulans hxB and Drosophila melanogaster ma-l genes with nifS from Azotobacter vinelandii suggests a mechanism for the insertion of the terminal sulphur atom in the molybdopterin cofactor. Mol. Microbiol. 38: 114-125

9. Andrade, A.C. 2000 ABC transporters and multidrug resistance in Aspergillus nidulans. PhD thesis, University of Wageningen.

10. Andrade, A.C., Del Sorbo, G., Van Nistelrooy, J.G.M. & De Waard, M.A. 2000 The ABC transporter AtrB from Aspergillus nidulans mediates resistance to all major classes of fungicides and some natural toxic compounds. Microbiology 146: 1987-1997

11. Andrade, A.C., Van Nistelrooy, J.G.M., Peery, R.B., Skatrud, P.L. & De Waard, M.A. 2000 The role of ABC transporters from Aspergillus nidulans in protection against cytotoxic agents and in antibiotic production. Mol. Gen. Genet. 263: 966-977

12. Appleyard, M.V.C.L., McPheat, W.L. & Stark, M.J.R. 2000 A novel 'two-component' protein containing histidine kinase and response regulator domains required for sporulation in Aspergillus nidulans. Curr. Genet. 37: 364-372

13. Appleyard, M.V.C.L., McPheat, W.L. & Stark, M.J.R. 2000 A recQ family DNA helicase gene from Aspergillus nidulans. DNA Sequence 11: 315-319

14. Argyrou, E., Sophianopoulou, V., Schultes, N. & Diallinas, G. 2001 Functional characterization of a maize purine transporter by expression in Aspergillus nidulans. Plant Cell 13: 953-964

15. Arikan, S., Lozano-Chiu, M., Paetznick, V. & Rex, J.H. 2001 In vitro susceptibility testing methods for caspofungin against Aspergillus and Fusarium isolates. Antimicrob. Agents Chemother. 45: 327-330

16. Arnaise, S., Zickler, D., Poisier, C. & Debuchy, R. 2001 pah1, a homeobox gene involved in hyphal morphology and microconidiogenesis in the filamentous ascomycete Podospora anserina. Mol. Microbiol. 39: 54-64

17. Bailey, A., Mueller, E. & Bowyer, P. 2000 Ornithine decarboxylase of Stagonospora (Septoria) nodorum is required for virulence toward wheat. J. Biol. Chem. 275: 14242-14247

18. Bañuelos, O., Casqueiro, J., Gutiérrez, S. & Martín, J.F. 2001 Intrachromosomal recombination after targeted monocopy integration in Penicillium chrysogenum: stabilization of the direct repeats to prevent loss of the inserted gene. Curr. Genet. 39: 231-236

19. Baracho, M. dos S. & Baracho, R.I. 2000 A simple method for the detection of recombinogenic substances in filamentous fungi. Genet. Mol. Biol. 23: 493-496

20. Barbar, E., Kleinman, B., Imhoff, D., Li, M., Hays, T.S. & Hare, M. 2001 Dimerization and folding of LC8, a highly conserved light chain of cytoplasmic dynein. Biochem. 40: 1596-1605

21. Bauters, T.G. & Nelis, H.J. 2000 Rapid and sensitive plate method for detection of Aspergillus fumigatus. J. Clin. Microbiol. 38: 3796-3789

22. Bautista, L.F., Aleksenko, A., Hentzer, M., Santerre-Henriksen, A. & Nielsen, J. 2000 Antisense silencing of the creA gene in Aspergillus nidulans. Appl. Env. Microbiol. 66: 4579-4581

23. Beauvais, A., Bruneau, J.M., Mol, P.C., Buitrago, M.J., Legrand, R. & Latgé, J.P. 2001 Glucan synthase complex of Aspergillus fumigatus. J. Bacteriol. 183: 2273-2279

24. Benen, J.A.E., Kester, H.C.M., Parenicová, L. & Visser, J. 2000 Characterization of Aspergillus niger pectate lyase A. Biochemistry 39: 15563-15569

25. Bohnert, H.J., Ayoubi, P., Borchert, C., Bressan, R.A., Burnap, R.L., Cushman, J.C., Cushman, M.A., Deyholos, M., Fischer, R., Galbraith, D.W., Hasegawa, P.M., Jenks, M., Kawasaki, S., Koiwa, H., Kore-eda, S., Lee, B.-H., Michalowski, C.B., Misawa, E., Nomura, M., Ozturk, N., Postier, B., Prade, R., Song, C.-P., Tanaka, Y., Wang, H. & Zhu, J.-K. 2001 A genomics approach towards salt stress tolerance. Plant Physiol. Biochem. (Paris) 39: 295-311

26. Bornemann, A.R., Hynes, M.J. & Andreanopoulos, A. 2000 The abaA homologue of Penicillium marneffei participates in two developmental programs: conidiation and dimorphic growth. Mol. Microbiol. 38: 1034-1047

27. Bornemann, A.R., Hynes, M.J. & Andreanopoulos, A. 2001 An STE12 homolog from the asexual, dimorphic fungus Penicillium marneffei complements the defect in sexual development of an Aspergillus nidulans steA mutant. Genetics 157: 1003-1014

28. Boyce, K.J., Hynes, M.J. & Alexopoulos, A. 2001 The CDC42 homolog of the dimorphic fungus Penicillium marneffei is required for correct cell polarization during growth but not development. J. Bacteriol. 183: 3447-3457

29. Braun, E.L., Halpern, A.L., Nelson, M.A. & Natvig, D.O. 2000 Large-scale comparison of fungal sequence information: mechanisms of innovation in Neurospora crassa and gene loss in Saccharomyces cerevisiae. Genome Res. 10: 416-430

30. Britton, K.L., Langridge, S.J., Baker, P.J., Weeradechapon, K., Sedelnikova, S.E., De Lucas, J.R., Rice, D.W. & Turner, G. 2000 The crystal structure and active site location of isocitrate lyase from the fungus Aspergillus nidulans. Structure (London) 8: 349-362

31. Brock, M., Darley, D., Textor, S. & Buckel, W. 2001 2-Methylisocitrate lyases from the bacterium Escherichia coli and the filamentous fungus Aspergillus nidulans: Characterization and comparison of both enzymes. Eur. J. Biochem. 268: 3577-3586

32. Brown, J.S., Aufauvre-Brown, A., Brown, J., Jennings, J.M., Arst, H.N.Jr. & Holden, D.W. 2000 Signature-tagged and directed mutagenesis identifying PABA synthesis as essential for Aspergillus fumigatus pathogenicity. Mol. Microbiol. 36: 1371-1380

33. Bruschi, G.C.M., de Souza, C.C., Fagundes, M.R. von Z.K., Dani, M.A.C., Goldman, M.H.S., Morris, N.R., Liu, L. & Goldman, G.H. 2001 Sensitivity to camptothecin in Aspergillus nidulans identifies a novel gene, scaA⁺, related to the cellular damage response. Mol. Genet. Genom. 265: 264-275

34. Busch, S., Hoffmann, B., Valerius, O., Starke, K., Düvel, K. & Braus, G.H. 2001 Regulation of the Aspergillus nidulans hisB gene by histidine starvation. Curr. Genet. 38: 314-322

35. Butenandt, J., Epple, R., Wallenborn, E.U., Eker, A.P., Gramlich, V. & Carell, T. 2000 A comparative repair study of thymine- and uracil-photodimers with model compounds and a photolyase repair enzyme. Chemistry-A European Journal 6: 62-72

36. Calera, JA., Sánchez-Weatherby, J., López-Medrano, R. & Leal, F. 2000 Distinctive properties of the catalase B of Aspergillus nidulans. FEBS Lett. 475: 117-120

37. Chang, P.-K., Yu, J., Ehrlich, K.C., Boue, S.M., Montalbano, P.G., Bhatnagar, D. & Cleveland, T.E. 2000 adhA in Aspergillus parasiticus is involved in conversion of 5'-hydroxyaverantin to averufin. Appl. Env. Microbiol. 66: 4715-4719

38. Chaveroche, M.-K., Ghigo, J.-M. & d'Enfert, C. 2000 A rapid method for efficient gene replacement in the filamentous fungus Aspergillus nidulans. Nucleic Acids Res. 28: E97.

39. Coca, M.A., Damsz, B., Yun, D.-J., Hasegawa, P.M., Bressan, R.A. & Narasimhan, M.L. 2000 Heterotrimeric G-proteins of a filamentous fungus regulate cell wall composition and susceptibility to a plant PR-5 protein. Plant J. 22: 61-69

40. Conlon, H., Zadra, I., Haas, H., Arst, H.N.Jr., Jones, M.G. & Caddick, M.X. 2001 The Aspergillus nidulans GATA transcription factor gene areB encodes at least three proteins and features three classes of mutation. Mol. Microbiol. 40: 361-375

41. D'Souza, C.A., Lee, B.N. & Adams, T.H. 2001 Characterization of the role of the FluG proein in asexual development of Aspergillus nidulans. Genetics 158: 1027-1036

42. Dawe, A.L., Willins, D.A. & Morris, N.R. 2000 Increased transformation efficiency of Aspergillus nidulans protoplasts in the presence of dithiothreitol. Anal. Biochem. 283: 111-112

43. De Lucas, J.R., Martínez, O., Pérez, P., López, I., Valenciano, S. & Laborda, F. 2001 The Aspergillus nidulans carnitine carrier encoded by acuH gene is exclusively located in mitochondria. Mol. Genet. Genomics 201: 193-198

44. de Queiroz, M.V., Pizzirani-Kleiner, A.A. & Azevedo, J.L. 2000 Electrophoretic characterization of Aspergillus nidulans strains with chromosomal duplications. Genet. Mol. Biol. 23: 293-297

45. De Souza, C.P.C., Osmani, A.H., Wu, L.-P., Spotts, J.L. & Osmani, S.A. 2000 Mitotic histone H3 phosphorylation by the NIMA kinase in Aspergillus nidulans. Cell 102: 293-302

46. Del Sorbo, G., Schoonbeek, H.-j. & De Waard, M.A. 2000 Fungal transporters involved in efflux of natural toxic compounds and fungicides. Fungal Genet. Biol. 30: 1-15

47. Delbecq, P., Calvo, O., Filipkowski, R.K., Piérard, A. & Messenguy, F. 2000 Functional analysis of the leader peptide of the yeast gene CPA1 and heterologous regulation by other fungal peptides. Curr. Genet. 38: 105-112

48. Denison, S.H. 2000 pH regulation of gene expression in fungi. Fungal Genet. Biol. 29: 61-71

49. Denison, S.H., Negrete-Urtasun, S., Mingot, J.-M., Tilburn, J., Mayer, W.A., Goel, A., Espeso, E.A., Peñalva, M.A. & Arst, H.N.Jr. 2001 Addendum to FGN 46 Aspergillus bibliography entry 38 (Putative membrane components of signal transduction pathways for ambient pH regulation in Aspergillus and meiosis in Saccharomyces are homologous. (Mol. Microbiol. 30: 259-264) Mol. Microbiol. 39: 211.

50. Dubus, A., Sami, M., Brown, T.J.N., Schofield, C.J., Baldwin, J.E. & Frère, J.-M. 2000 Studies of isopenicillin N synthase enzymatic properties using a continuous spectrophotometric assay. FEBS Lett. 485: 142-146

52. Eckert, S.E., Kübler, E., Hoffmann, B. & Braus, G.H. 2000 The tryptophan synthase-encoding trpB gene of Aspergillus nidulans is regulated by the cross-pathway control system. Mol. Gen. Genet. 263: 867-876

53. Efimov, V.P. & Morris, N.R. 2000 The LIS1-related NUDF protein of Aspergillus nidulans interacts with the coiled-coil domain of the NUDE/RO11 protein. J. Cell Biol. 150: 681-688

54. Elrod, S.L., Jones, A., Berka, R.M. & Cherry, J.R. 2000 Cloning of the Aspergillus oryzae 5-aminolevulinate synthase gene and its use as a selectable marker. Curr. Genet. 38: 291-298

55. Espeso, E.A. & Arst, H.N.Jr. 2000 On the mechanism by which alkaline pH prevents expression of an acid-expressed gene. Mol. Cell. Biol. 20: 3355-3363

56. Espeso, E.A., Roncal, T., Díez, E., Rainbow, L., Bignell, E., Álvaro, J., Suárez, T., Denison, S.H., Tilburn, J., Arst, H.N.Jr. & Peñalva, M.A. 2000 Erratum to FGN 47, Aspergillus bibliography entry 44. : On how a transcription factor can avoid

its proteolytic activation in the absence of signal transduction. EMBO J. 19: 2391.

57. Espinel-Ingroff, A. 2001 Comparison of the E-test with the NCCLS M38-P method for antifungal susceptibility testing of common and emerging pathogenic filamentous fungi. J. Clin. Microbiol. 39: 1360-1367

58. Feng, Y., Olson, E.C., Stukenberg, P.T., Flanagan, L.A., Kirschner, M.W. & Walsh, C.A. 2000 LIS1 regulates CNS lamination by interacting with mNudE, a central component of the centrosome. Neuron 28: 665-679

59. Fillinger, S., Ruijter, G., Tamás, M.J., Visser, J., Thevelein, J.M. & d'Enfert, C. 2001 Molecular and physiological characterization of the NAD-dependent glycerol 3-phosphate dehydrogenase in the filamentous fungus Aspergillus nidulans. Mol. Microbiol. 39: 145-157

60. Fischer, G., Müller, T., Schwalbe, R., Ostrowski, R. & Dott, W. 2000 Species-specific profiles of mycotoxins produced in cultures and associated with conidia of airborne fungi derived from biowaste. Int. J. Hyg. Environ. Health 203: 105-116

61. Fischer-Parton, S., Parton, R.M., Hickey, P.C., Dijksterhuis, J., Atkinson, H.A. & Read, N.D. 2000 Confocal microscopy of FM4-64 as a tool for analysing endocytosis and vesicle trafficking in living fungal hyphae. J. Microscopy. (Oxford) 198: 246-259

62. Flipphi, M., Mathieu, M., Cirpus, I., Panozzo, C. & Felenbok, B. 2001 Regulation of the aldehyde dehydrogenase gene (aldA) and its role in the control of the coinducer level necessary for induction of the ethanol utilization pathway in Aspergillus nidulans. J. Biol. Chem. 276: 6950-6958

63. Franzoni, M.G.M. & Castro-Prado, M.A.A. 2000 Characterization and mapping of an informational suppressor in Aspergillus nidulans. Biol. Res. 33: 11-19

64. Franzoni, M.G.M. & Castro-Prado, M.A.A. 2000 Effect of 5-azacytidine on the induction of mitotic recombination in diploid cells of Aspergillus nidulans. Cytologia (Tokyo) 65: 43-48

65. Fraser, J.A., Davis, M.A. & Hynes, M.J. 2001 The formamidase gene of Aspergillus nidulans: regulation by nitrogen metabolite repression and transcriptional interference by an overlapping upstream gene. Genetics 157: 119-131

66. Fry, A.M., Descombes, P., Twomey, C., Bacchieri, R. & Nigg, E.A. 2000 The NIMA-related kinase X-Nek2B is required for efficient assembly of the zygotic centrosome in Xenopus laevis. J. Cell Sci. 113: 1973-1984

67. Fujii, I., Watanabe, A., Sankawa, U. & Ebizuka, Y. 2001 Identification of Claisen cyclase domain in fungal polyketide synthase WA, a naphthopyrone synthase of Aspergillus nidulans. Chem. Biol. (London) 8: 189-197

68. Fujiwara, M., Ichinomiya, M., Motoyama, T., Horiuchi, H., Ohta, A. & Takagi, M. 2000 Evidence that the Aspergillus nidulans class I and class II chitin synthase genes, chsC and chsA, share critical roles in hyphal wall integrity and conidiophore development. J. Biochem. 127: 359-366

69. Gallardo, M.E., Desviat, L.R., Rodríguez, J.M., Esparza-Gordillo, J., Pérez-Cerdá, C., Pérez, B., Rodríguez-Pombo, P., Criado, O., Sanz, R., Morton, D.H., Gibson, K.M. le T.P., Ribes, A., Rodrígues de Cordoba, S., Ugarte, M. & Peñalva, M.A. 2001 The molecular basis of 3-methylcrotonylglycinuria, a disorder of leucine catabolism. Am. J. Hum. Genet. 68: 334-346

70. Geese, W.J. & Waring, R.B. 2001 A comprehensive characterization of a group IB intron and its encoded maturase reveals that protein-assisted splicing requires an almost intact intron RNA. J. Mol. Biol. 308: 609-622

71. Geiser, D.M., Dorner, J.W., Horn, B.W. & Taylor, J.W. 2000 The phylogenetics of mycotoxin and sclerotium production in Aspertillus flavus and Aspergillus oryzae. Fungal Genet. Biol. 31: 169-179

72. Gocke. C.D., Osmani, S.A. & Miller, B.A. 2000 The human homologue of the Aspergillus nuclear migration gene nudC is preferentially expressed in dividing cells and ciliated epithelia. Histochem. Cell Biol. 114: 293-301

73. Graessle, S., Dangl, M., Haas, H., Mair, K., Trojer, P., Brandtner, E.-M., Walton, J.D., Loidl, P. & Brosch, G. 2000 Characterization of two putative histone deacetylase genes from Aspergillus nidulans. Biochim. Biophys. Acta 1492: 120-126

74. Graïa, F., Berteaux-Lecellier, V., Zickler, D. & Picard, M. 2000 ami1, an orthologue of the Aspergillus nidulans apsA gene, is involved in nuclear migration events throughout the life cycle of Podospora anserina. Genetics 155: 633-646

75. Grossi, P., Farina, C., Fiocchi, R., Gasperina, D.D. 2000 Prevalence and outcome of invasive fungal infections in 1,963 thoracic organ transplant recipients: A multicenter retrospective study. Transplantation 70: 112-116

76. Grynberg, M., Topczewski, J., Godzik, A. & Paszewski, A. 2000 The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferase. Microbiol. 14: 2695-2703

77. Guest, G.M. & Momany, M. 2000 Analysis of cell wall sugars in the pathogen Aspergillus fumigatus and the saprophyte Aspergillus nidulans. Mycologia 92: 1047-1050

78. Hall, D., Bhandarkar, S.M., Arnold, J. & Jiang, T. 2001 Physical mapping with automatic capture of hybridization data. Bioinformatics (Oxford) 17: 205-213

79. Hall, D., Bhandarka, S.M. & Wang, J. 2001 ODS2: a multiplatform software application for creating integrated physical and genetic maps. Genetics 157: 1045-1056

80. Hamari, Z., Jukász, Á., Gácser, A., Kucsera, J., Pfeiffer, I & Kevei, F. 2001 Intronmobility results in rearrangement in mitochondrial DNAs of heterokaryon incompatible Aspergillus japonicus strains after protoplast fusion. Fungal Genet. Biol. 33: 83-95

81. Han, G., Liu, B., Zhang, J., Zuo, W., Morris, N.R. & Xiang, X. 2001 The Aspergillus cytoplasmic dynein heavy chain and NUDF localize to microtubule ends and affect microtubule dynamics. Curr. Biol. 11: 719-724

82. Han, K.-H., Han, K.-H., Yu, J.-H., Chae, K.-S., Jahng, K.-Y. & Han, D.-M. 2001 The nsdD gene encodes a putative GATA-type transcription factor necessary for sexual development of Aspergillus nidulans. Mol. Microbiol. 41: 299-309

83. Hartmann, M., Heinrich, G. & Braus, G.H. 2001 Regulative fine-tuning of the two novel DAHP isoenzymes aroFp and aroGp of the filamentous fungus Aspergillus nidulans. Arch. Microbiol. 175: 112-121

84. Henry, T., Iwen, P.C. & Hinrichs, S.H. 2000 Identification of Aspergillus species using internal transcribed spacer regions 1 and 2. J. Clin. Microbiol. 38: 1510-1515

85. Heyer, A.G. & Wendenburg, R. 2001 Gene cloning and functional characterization by heterologous expression of the fructosyltransferase of Aspergillus sydowi IAM 2544. Appl. Env. Microbiol. 67: 363-370

86. Hicks, J., Lockington, R.A., Strauss, J., Dieringer, D., Kubicek, C.P., Kelly, J. & Keller, N. 2001 RcoA has pleiotropic effects on Aspergillus nidulans cellular development. Mol. Microbiol. 39: 1482-1493

87. Hodges, R.L., Kelkar, H.S., Xuei, X., Skatrud, P.L., Keller, N.P., Adams, T.H., Kaiser, R.E., Vinci, V.A. & McGilvray, D. 2000 Characterization of an echinocandin B-producing strain blocked for sterigmatocystin biosynthesis reveals a translocation in the stcW gene of the aflatoxin biosynthetic pathway. J. Indust. Microbiol. Biotechnol. 25: 333-341

88. Hoffmann, B., Eckert, S.E., Krappmann, S. & Braus, G.H. 2001 Sexual diploids of Aspergillus nidulans do not form by random fusion of nuclei in the heterokaryon. Genetics 157: 141-147

89. Hoffmann, B., Wanke, C., LaPaglia, S.K. & Braus, G.H. 2000 c-Jun and RACK1 homologues regulate a control point for sexual development in Aspergillus nidulans. Mol. Microbiol. 37: 28-41

90. Hoyt, M.A., Williams-Abbott, L.J., Pitkin, J.W. & Davis, R.H. 2000 Cloning and expression of the S-adenosylmethionine decarboxylase gene of Neurospora crassa and processing of its product. Mol. Gen. Genet. 263: 664-673

91. Hughes, M.A., Barnett, D.A., Mohd-Noor, Z., Whittaker, S.L., Doonan, J.H. & Assinder, S.J. 2000 The Aspergillus nidulans hfa mutations affect genomic stability and cause diverse defects in cell cycle progression and cellular morphogenesis. Mycol. Res. 104: 1439-1448

92. Ichioka, D., Itoh, T. & Itoh, Y. 2001 An Aspergillus nidulans uvsC null mutant is deficient in homologous DNA integration. Molec. Gen. Genet. 264: 709-715

93. Ishida, H., Hata, Y., Kawato, A., Abe, Y., Suginami, K. & Imayasu, S. 2000 Identification of functional elements that regulate the glucoamylase-encoding gene (glaB) expressed in solid-state culture of Aspergillus oryzae. Curr. Genet. 37: 373-379

94. Jahn, B., Boukhallouk, F., Lotz, J., Langfelder, K., Wanner, G. & Brakhage, A.A. 2000 Interaction of human phagocytes with pigmentless Aspergillus conidia. Infect. Immun. 68: 3736-3739

95. Jekosch, K. & Kück, U. 2000 Glucose dependent transcriptional expression of the cre1 gene in Acremonium chrysogenum strains showing different levels of cephalosporin C production. Curr. Genet. 37: 388-395

96. Jeong, H.-Y., Cho, G.-B., Han, K.-Y., Kim, J., Han, D.M., Jahng, K.-Y. & Chae, K.-S. 2001 Differential expression of house-keeping genes of Aspergillus nidulans during sexual development. Gene 262: 215-219

97. Jeong, H.-Y., Han, D.-M., Jahng, K.-Y. & Chae, K.-S. 2000 The rpl16a gene for ribosomal protein L16A identified from expressed sequence tags is differentially expressed during sexual development of Aspergillus nidulans. Fungal Genet. Biol. 31: 69-78

98. Jones, I.G., Fairhurst, V. & Sealy-Lewis, H.M. 2001 ADHII in Aspergillus nidulans is induced by carbon starvation stress. Fungal Genet. Biol. 32: 33-43

99. Joseph, J.D. & Means, A.R. 2000 Identification and characterization of two Ca²⁺/CaM-dependent protein kinases required for normal nuclear division in Aspergillus nidulans. J. Biol. Chem. 275: 38230-38238

100. Justino, A., Nozawa, S.R., Maccheroni, W.Jr., May, G.S., Martinez-Rossi, N.M. & Rossi, A. 2001 The Aspergillus nidulans pyrG89 mutation alters glycosylation of secreted acid phosphatase. Fungal Genet. Biol. 32: 113-120

101. Kaminskyj, S.G.W. 2000 Septum position is marked at the tip of Aspergillus nidulans hyphae. Fungal Genet. Biol. 31: 105-113

102. Kato, M., Hayashi, K., Kobayashi, T. & Tsukagoshi, N. 2000 A simple and rapid method for the preparation of a cell-free extract with CCAAT-binding activity from filamentous fungi. Biosci.Biotechnol. Biochem. 64: 455-457

103. Katz, M.E., Masoumi, A., Burrows, S.R., Shirtliff, C.G. & Cheetham, B.F. 2000 The Aspergillus nidulans xprF gene encodes a hexokinase-like protein involved in the regulation of extracellular proteases. Genetics 156: 1559-1571

104. Kaul, S. & Sumbali, G. 1999 Production of extracellular keratinases by keratinophilic fungal species inhabiting feathers of living poultry birds (Gallus domesticus): A comparison. Mycopathologia 146: 19-24

105. Kawasaki, L. & Aguirre, J. 2001 Multiple catalase genes are differentially regulated in Aspergillus nidulans. J. Bacteriol. 183: 1434-1440

106. Khalaj, V., Brookman, J.L. & Robson, G.D. 2001 A study of the protein secretory pathway of Aspergillus niger using a glucoamylase-GFP fusion protein. Fungal Genet. Biol. 32: 55-65

107. Klich, M.A., Mullaney, E.J., Daly, C.B. & Cary, J.W. 2000 Molecular and physiological aspects of aflatoxin and sterigmatocystin biosynthesis by Aspergillus tamarii and A. ochraceoroseus. Appl. Microbiol. Biotechnol. 53: 605-609

108. Koibuchi, K., Nagasaki, H., Yuasa, A., Kataoka, J. & Kitamoto, K. 2000 Molecular cloning and characterization of a gene encoding glutaminase from Aspergillus oryzae. Appl. Microbiol. Biotechnol. 54: 59-68

109. Kosmidou, E., Lunness, P. & Doonan, J.H. 2001 A type 2A protein phosphatase gene from Aspergillus nidulans is involved in hyphal morphogenesis. Curr. Genet. 39: 25-34

110. Kreuzman, A.J., Hodges, R.L., Swartling, J.R., Pohl, T.E., Ghag, S.K., Baker, P.J., McGilvray, D. & Yeh, W.K. 2000 Membrane-associated echinocandin B deacylase of Actinoplanes utahensis: Purification, characterization, heterologous cloning and enzymatic deacylation reaction. J. Indust. Microbiol. Biotechnol. 24: 173-180

111. Kubodera, T., Yamashita, N. & Nishimura, A. 2000 Pyrithiamine resistance gene (ptrA) of Aspergillus oryzae: cloning, characterization and application as a dominant selectable marker for transformation. Biosci. Biotechnol. Biochem. 64: 1416-1421

112. Kusakabe, T., Sugimoto, Y., Hirota, Y., Toné, S., Kawaguchi, Y., Koga, K. & Ohyama, T. 2000 Isolation of replicational cue elements from a library of bent DNAs of Aspergillus oryzae. Mol. Biol. Repts. 27: 13-19

113. Larrondo, L.F., Lobos, S., Stewart, P., Cullen, D. & Vicuña, R. 2001 Isoenzyme multiplicity and characterization of recombinant manganese peroxidases from Ceriporiopsis subvermispora and Phanerochaete chrysosporium. Appl. Env. Microbiol. 67: 2070-2075

114. Lee, D.W., Kim, S., Kim, S.-J., Han, D.M., Jahng, K.-Y. & Chae, K.-S. 2001 The lsdA gene is necessary for sexual development inhibition by a salt in Aspergillus nidulans. Curr. Genet. 39: 237-243

116. Levett, L.J., Si-Hoe, S.M., Liddle, S., Wheeler, K., Smith, D., Lamb, H.K., Newton, G.H., Coggins, J.R. & Hawkins, A.R. 2000 Identification of domains responsible for signal recognition and transduction within the QUTR transcription repressor protein. Biochem. J. 350: 189-197

117. Li Destri Nicosia, M.G., Brocard-Masson, C., Demais, S., Van, A.H., Daboussi, M.-J. & Scazzocchio, C. 2001 Heterologous transposition in Aspergillus nidulans. Mol. Microbiol. 39: 1330-1344

118. Liu, B.-H., Bhatnagar, D. & Chu, F.S. 1999 Purification and characterization of 40-KDa sterigmatocystin O-methyltransferase involved in aflatoxin biosynthesis. Natural Toxins 7: 63-69

119. Lockington, R.A. & Kelly, J.M. 2001 Carbon catabolite repression in Aspergillus nidulans involves deubiquitination. Mol. Microbiol. 40: 1311-1321

120. Loke, P. & Sim, T.-S. 2000 Mutational analysis of tyrosine-191 in the catalysis of Cephalosporium acremonium isopenicillin N synthase. J. Biochem. (Tokyo) 127: 585-589

121. Lorang, J.M., Tuori, R.P., Martinez, J.P., Sawyer, T.L., Redman, R.S., Rollins, J.A., Wolpert, T.J., Johnson, K.B., Rodriguez, R.J., Dickman, M.B. & Ciufetti, L.M. 2001 Green

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122. Magnusson, J. & Schnürer, J. 2001 Lactobacillus coryniformis subsp. coryniformis strain Si3 produces a broad-spectrum proteinaceous antifungal compound. Appl. Env. Microbiol. 67: 1-5

123. Manfield, I.W., Reynolds, L.A., Gittins, J. & Kneale, G.G. 2000 The DNA-binding domain of the gene regulatory protein AreA extends beyond the minimal zinc-finger region conserved between GATA proteins. Biochim. Biophys. Acta 1493: 325-332

126. Marie, G., Serani, L., Laprévote, O., Cahuzac, B., Guittet, E. & Felenbok, B. 2000 Differential chemical labeling of the AlcR DNA-binding domain from Aspergillas nidulans versus its complex with a 16-mer DNA target: identification of an essential tryptophan involved in the recognition and the interaction with the nucleic acid. Prot. Sci. 10: 99-107

127. Martin, C., Roberts, D., van der Weide, M., Rossau, R., Jannes, G., Smith, T. & Maher, M. 2000 Development of a PCR-based line probe assay for identification of fungal pathogens. J. Clin. Microbiol. 38: 3735-3742

128. Martín, J.F. 2000 Molecular control of expression of penicillin biosynthesis genes in fungi: Regulatory proteins interact with a bidirectional promoter region. J. Bacteriol. 182: 2355-2362

129. Mathieu, M., Fillinger, S. & Felenbok, B. 2000 In vivo studies of upstream regulatory cis-acting elements of the alcR gene encoding the transactivator of the ethanol regulon in Aspergillus nidulans. Mol. Microbiol. 36:123-131

130. McGuire, S.L., Roe, D.L., Carter, B.W., Carter, R.L., Grace, S.P., Hays, P.L., Lang, G.A., Mamaril, J.L.C., McElvaine, A.T., Payne, A.M., Schrader, M.D., Wahrle, S.E. & Young, C.D. 2000 Extragenic suppressors of the nimX2^cdc2 mutation of Aspergillus nidulans affect nuclear division, septation and conidiation. Genetics 156: 1573-1584

131. McIntyre, M., Dynesen, J. & Nielsen, J. 2001 Morphological characterization of Aspergillus nidulans: growth, septation and fragmentation. Microbiol. (Reading) 147: 239-246

132. Meintanis, C., Karagouni, A.D. & Diallinas, G. 2000 Amino acid residues N⁴⁵⁰ and Q⁴⁴⁹ are critical for the uptake capacity and specificity of UapA, a prototype of a nucleobase-ascorbate transporter family. Mol. Membrane Biol. 17: 47-57

133. Mingot, J.M., Espeso, E.A., Díez, E. & Peñalva, M.A. 2001 Ambient pH signaling regulates nuclear localization of the Aspergillus nidulans PacC transcription factor. Mol. Cell. Biol. 21: 1688-1699

134. Momany, M. & Taylor, I. 2000 Landmarks in the early duplication cycles of Aspergillus fumigatus and Aspergillus nidulans: polarity, germ tube emergence and septation. Microbiology 146: 3279-3284

135. Momany. M., Zhao, J., Lindsey, R. & Westfall, P.J. 2001 Characterisation of the Aspergillus nidulans septin (asp) gene family. Genetics 157: 969-977

136. Morozov, I.Y., Galbis Martinez, M., Jones, M.G. & Caddick, M.X. 2000 A defined sequence within the 3' UTR of the areA transcript is sufficient to mediate nitrogen metabolite signalling via accelerated deadenylation. Mol. Microbiol. 37: 1248-1257

137. Mullins, E.D., Chen, X., Romaine, P., Raina, R., Geiser, D.M. & Kang, S. 2001 Agrobacterium-mediated transformation of Fusarium oxysporum: an efficient tool for insertional mutagenesis and gene transfer. Phytopathol. 91: 173-180

138. Ng, K.P., Saw, T.L., Madasamy, M. & Soo Hoo T.S. 1999 Onychomycosis in Malaysia. Mycopathologia 147: 29-32

139. Nicholas, H.B..Jr., Arst, H.N.Jr. & Caddick, M.X. 2001 Evaluating low level sequence identities. Are Aspergillus QUTA and AROM homologous? Eur. J. Biochem. 268: 414-419

140. Nichols, C.E., Ren, J., Lamb, H., Haldane, F., Hawkins, A.R. & Stammers, D.K. 2001 Identification of many crystal forms of Aspergillus nidulans dehydroquinate synthase. Acta Crystallographica D 57: 306-309

141. Nielsen, K., Payne, G.A. & Boston, R.S. 2001 Maize ribosome-inactivating protein inhibits normal development of Aspergillus nidulans and Aspergillus flavus. Mol. Plant-Microbe Interact. 14: 164-172

142. Nielsen, M.L., Hermansen, T.D. & Aleksenko, A. 2001 A family of DNA repeats in Aspergillus nidulans has assimilated degenerated transposons. Mol. Genet. Genomics 265: 883-887

143. Niethammer, M., Smith, D.S., Ayala, R., Peng, J., Ko, J., Lee, M.-S., Morabito, M. & Tsai, L.-H. 2000 NUDEL is a novel Cdk5 substrate that associates with LIS1 and cytoplasmic dynein. Neuron 28: 697-711

144. Nishimura, M., Hayashi, N., Jwa, N.-S., Lau, G.W., Hamer, J.E. & Hasebe, A. 2000 Insertion of the LINE retrotransposon MGL causes a conidiophore pattern mutation in Magnaporthe grisea. Mol. Plant-Microbe Interact. 13: 892-894

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146. Oberegger, H., Zadra, I., Schoeser, M. & Haas, H. 2000 Iron starvation leads to increased expression of Cu/Zn-superoxide dismutase in Aspergillus. FEBS Lett. 485: 113-116

148. Osherov, N., Mathew, J. & May, G. 2000 Polarity-defective mutants of Aspergillus nidulans. Fungal Genet. Biol. 31: 181-188

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150. Pascon, R.C. & Miller, B.L. 2000 Morphogenesis in Aspergillus nidulans requires Dopey (DopA), a member of a novel family of leucine zipper-like proteins conserved from yeast to humans. Mol. Microbiol. 36: 1250-1264

151. Pascon, R.C., Pizzirani-Kleiner, A.A. & Miller, B.L. 2001 The Aspergillus nidulans bncA1 mutation causes defects in the cell division cycle, nuclear movement and developmental morphogenesis. Molec. Gen. Genet. 264: 546-554

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153. Piotrowska, M., Natorff, R. & Paszewski, A. 2000 sconC, a gene involved in the regulation of sulphur metabolism in Aspergillus nidulans, belongs to the SKP1 gene family. Mol. Gen. Genet. 264: 276-282

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157. Prade, R.A., Ayoubi, P., Krishnan, S., Macwana, S. & Russell, H. 2001 Accumulation of stress and inducer-dependent plant-cell-wall-degrading enzymes during asexual development in Aspergillus nidulans. Genetics 157: 957-967

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161. Record, E., Moukha, S., Asther, M. & Asther, M. 2001 Cloning and expression in phospholipid containing cultures of the gene encoding the specific phosphatidylglycerol/phosphatidylinositol transfer protein from Aspergillus oryzae: evidence that the pg/pi-tp is tandemly arranged with the putative 3-ketoacyl-CoA thiolase gene. Gene 262: 61-72

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163. Rollins, J.A. & Dickman, M.B. 2001 pH signaling in Sclerotinia sclerotiorum: Identification of a pacC/RIM1 homolog. Appl. Env. Microbiol. 67: 75-81

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165. Scherer, M. & Fischer, R. 2001 Molecular characterization of a blue-copper laccase, TILA, of Aspergillus nidulans. FEMS Microbiol. Lett. 199: 207-213

166. Schier, N., Liese, R. & Fischer, R. 2001 A Pcl-like cyclin of Aspergillus nidulans is transcriptionally activated by developmental regulators and is involved in sporulation. Mol. Cell. Biol. 21: 4075-4088

167. Schierová, M., Linka, M. & Pazoutová, S. 2000 Sulfate assimilation in Aspergillus terreus: analysis of genes encoding ATP-sulfurylase and PAPS-reductase. Curr. Genet. 38: 126-131

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172. Skjot, M., Kauppinen, S., Kofod, L.V., Fuglsang, C., Pauli, M., Dalbøge, H. & Andersen, L.N. 2001 Functional cloning of an endo-arabinase from Aspergillus aculeatus and its heterologous expression in A. oryzae and tobacco. Mol. Genet. Genomics 265: 913-921

173. Small, A.J., Todd, R.B., Zanker, M.C., Delimitrou, S., Hynes, M.J. & Davis, M.A. 2001 Functional analysis of TamA, a coactivator of nitrogen-regulated gene expression in Aspergillus nidulans. Mol. Genet. Genomics 256: 636-646

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176. Sun, J., Boettner, D., Huebner, N., Xu, F., Rhodes, J.C. & Askew, D.S. 2001 Molecular cloning of cgrA, the gene encoding the Aspergillus nidulans ortholog of Saccharomyces cerevisiae CGR1. Curr. Microbiol. 42: 403-407

177. Sun, S., Kaluzhny, Y. & Ravid, K. 1999 Ectopic expression of the Aspergillus nidulans mitotic inducer, nimA kinase, in megakaryocytes: effect on polyploidization. Exp. Hematol. 27: 594-604

178. Swart, K., van Heemst, D., Slakhorst, M., Debets, F. & Heyting, C. 2001 Isolation and characterization of sexual sporulation mutants of Aspergillus nidulans. Fungal Genet. Biol. 32: 25-35

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180. Tag, A., Hicks, J., Garifullina, G., Ake, C.Jr., Phillips, T.D., Beremand, M. & Keller, N. 2000 G-protein signalling mediates differential production of toxic secondary metabolites. Mol. Microbiol. 38: 658-665

181. Tanaka, A., Kamei, K.-i., Tanoue, S., Papagiannopoulos, P., Steidl, S., Brakhage, A.A., Davis, M.A., Hynes, M.J., Kato, M., Kobayashi, T. & Tsukagoshi, N. 2001 AoHapB, AoHapC and AoHapE, subunits of the Aspergillus oryzae CCAAT-binding complex are functionally interchangeable with the corresponding subunits in Aspergillus nidulans. Curr. Genet. 39: 175-182

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183. Tani, S., Katsuyama, Y., Hayashi, T., Suzuki, H., Kato, M., Gomi, K., Kobayashi, T. & Tsukagoshi, N. 2001 Characterization of the amyR gene encoding a transcriptional activator for the amylase genes in Aspergillus nidulans. Curr. Genet. 39: 10-15

184. Tarutani, Y., Ohsumi, K., Arioka, M., Nakajima, H. & Kitamoto, K. 2001 Cloning and characterization of Aspergillus nidulans vpsA gene which is involved in vacuolar biogenesis. Gene 268: 23-30

185. Tavoularis, S., Scazzocchio, C. & Sophianopoulou, V. 2001 Functional expression and cellular localization of a green fluorescent protein-tagged proline transporter in Aspergillus nidulans. Fungal Genet. Biol. 33: 115-125

186. Tenney. K., Hunt, I., Sweigard, J., Pounder, J.I., McClain, C., Bowman, E.J. & Bowman, B.J. 2000 hex-1, a gene unique to filamentous fungi, encodes the major protein of the Woronin body and functions as a plug for septal pores. Fungal Genet. Biol. 31: 205-217

187. Tréton, B., Blanchin-Roland, S., Lambert, M., Lépingle, A. & Gaillardin, C. 2000 Ambient pH signalling in ascomycetous yeasts involves homologues of the Aspergillus nidulans genes palF and palH. Mol. Gen. Genet. 263: 505-513

188. Tudzynski, B., Liu, S. & Kelly, J.M. 2000 Carbon catabolite repression in plant pathogenic fungi: isolation and characterization of the Gibberella fujikuroi and Botrytis cinerea creA genes. FEMS Microbiol. Lett. 184: 9-15

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190. Valerius, O., Draht, O., Kübler, E., Adler, K., Hoffmann, B. & Braus, G.H. 2001 Regulation of hisHF transcription of Aspergillus nidulans by adenine and amino acid limitation. Fungal Genet. Biol. 32: 21-31

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193. vanKuyk, P.A., Cheetham, B.F. & Katz, M.E. 2000 Analysis of two Aspergillus nidulans genes encoding extracellular proteases. Fungal Genet. Biol. 29: 201-210

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201. Xiang, X., Han, G., Winkelmann, D.A., Zuo, W. & Morris, N.R. 2000 Dynamics of cytoplasmic dynein in living cells and the effect of a mutation in the dynactin complex actin-related protein Arp1. Curr. Biol. 10: 603-606

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ABC transporters 11 46

Acetaldehyde co-inducer 62

Acid phosphatase 100

Actin 96 106

Adenine regulation 190

Aflatoxin 37 107 118 180 205 206

Airborne fungi 60

Alcohol dehydrogenase 37

Alcohol regulation 62

Alkaptanuria 162

Alternative splicing 40

Aminolevulinate synthase 56

Amphotericin B 57

Amylase 4 182 183

AnCF transcription factor 174 199

Antifungals 39 57 110 122 141

Antimicrotubule drugs 151

Antisense 22 207

Apocytochrome B 70

Arabinase 172

Arginine regulation 47

Aromatic biosynthesis and degradation 83 139

Aryl alcohol oxidase 194

Aspartic protease 193

Aspergillopepsin 193

Aspergillosis 75

ATPase 2

Autophagy 7

Autoregulation 129 174

Averufin oxidation 206

Azacytidine 64

Benlate 211

Bent DNA 112

Benzoate hydroxylase 191

Bidirectional promoter 128

Biowaste 60

Brefeldin A 106

Calcium control 202

Calcium-ATPase 202

Calcium-dependent kinase 99

Calmodulin 99

Camptothecin 33

Carbon regulation 2 4 62 93 95 102 119 128 129 147 182 183

188 193 196

Carbon starvation stress 98

Carnitine carrier 43

Caspofungin 15

Catabolic inactivation 7

Catalases 36 105

CCAAT-binding complex 174 181 102

cDNA amplification 169

Cell cycle 26 28 45 66 81 91 99 130 134 151 192

Cell wall porosity 39

Cell wall sugars 77

Centromere 6

Centrosome 58 66

Cephalosporin 95

CGR1 homologue 176

Checkpoint G1/S 130

Chemostat 179

Chitin syntases 68

Chlorite resistance 209

Chromatin condensation 45 66

Chromosome IV 6

Cilia 72

Claisen cyclase domain 67

Coatomer complex 115

Coiled coil proteins 5 53

Compost 60

Confocal microscopy 61

Conidial germination 134 149

Conidial pigments 94 198

Conidiation 12 16 26 28 41 68 74 130 144 150 151 155 157

166 170 179 210

Cosmid contig map 6 78 156

Cross pathway control 34 52 83 89 190

Crystal structure 30

Culture density 4

Cyclic AMP dependent kinase 170

Cyclin 166

Cycloheximide resistance 179

Cystathionine-g-lyase 125

Cysteine biosynthesis 76

Cytochrome b 203

Cytochrome P450 191

DAHP synthase 83

Dane transposons 142

Deadenylation 136

Dehydroquinate synthase 140

Deubiquitination 119

Dimerization 5 20

Dimorphism 26

DNA bends 112

DNA binding domain 123 126

DNA rearrangement 80

DNA repair 33

DNA repeats 142

Dominant suppressor 41

Duplication strains 19 44

Dynactin 53 201

Dynamin 184

Dynein 20 53 58 81 164 200 201

Echinocandin 15 87

Echinocandin B deacetylase 110

Electron immunochemistry 43

Electrophoretic karyotyping 44

Endocytosis 61

Enzyme proteolysis 7

EST analysis 25 157

Ethanol regulon 129

Evolution in chemostat 179

Expression system 207

Feather-associated fungi 104

Finger nails 138

Flavour release 124

Fluffy mutants 179

Formamidase 65

Fructosyltransferase 85

Fungal detection 21

Fungicide resistance 10

G protein signalling 39

GATA transcription factor 40 82

Gene clusters 128 161 205

Gene families 135

Gene replacement 38

Genome comparisons 29

Genomic analysis 25

Germination 134 149

Glucan synthase 23

Glucan synthase inhibitor 15

Glucoamylase 93

Glucose regulation 205

Glucosidase 205

Glutaminase 108

Glycerol 3 phosphate dehydrogenase 59

Glycerol biosynthesis 59

Glycosylation 36 51 100 145 202

Green fluorescent protein 81 106 121 154 185 189 201

Group IB intron 70

GTPases 158

Haem biosynthesis 54

Heat shock 105 157

Helicase 13

Heterologous transposition 117

Hexokinase homology 103

Hexose transporter 205

His-tagging 43

Histidine kinase 12 155

Histone deacetylase 73

Histone phosporylation 45

Homeobox gene 16

Homoaconitase 199

Homogentisate dioxygnease 162

Homologous integration 92

Homoserine O-acetyltransferase 76

Hybridization data 78

Hydroxyaverantin dehydrogenase 37

Hyphal fragmentation 131

Hyphal growth 170 210

Hyphal morphology 59 91 109 131

Hyphal polarity 28

Hyphal walls 59

Imidazole glycerophosphate syn 190

Immunocompromised patients 75

Inducer-independent expression 157

Insertion mutagenesis 137 144

Intrachromosomal recombination 18

Intrahyphal transport 201

Intron mobility 80

Intron splicing 70

Inulin biosynthesis 85

Iron starvation 146

Isocitrate lyase 7 30

Isopenicillin N synthase 50 120

Itraconazole 57

Keratinases 104

Laccase 165

Lactam antibiotics 95

Leader peptide 47

Leucine catabolism cluster 69

Leucine zipper 40 150

Lichen fungus 171

Lignin degradation 194

LINE insertion 144

Linkage map 6

Lissencaphaly 53 58 143 164

Maize purine transporter 14

Manganese peroxidase 113

Mannosidase I family 51

MAP kinase pathway 27 28

Maturase 70

Meiosis 49

Membrane spanning domain 49

Messenger stability 136

Methylcrotonyl-CoA carboxylase 69

Methylcrotonylglycinuria 69

Methylisocitrate lyases 31

Methylumbelliferyl arabinoside cleaving enzyme 21

Microtubules 81 106 201

Mitochondrial enzymes 43 56

Mitochondrial introns 80

Mitochondrial localization 43

Mitochondrial tRNA synthetase 148

Mitosis 91 99 134 192

Mitotic catastrophe 151

Mitotic recombination 64

Model of protein production 3

Molybdenum cofactor 8

Molybdoprotein transulphurylase 8

Motors 175

mRNA deadenylation 136

Multidrug resistance 9 10 11 46

Multiple coding 40

Multiple transcripts 191

Mutagenicity 211

Mutants in chemostats 179

Mycotoxins 60 71 107 170 180 204 206

NADH oxidase 205

Naphthopyrone synthase 67 198

Neuronal migration 200

Nitrate transporter 209

Nitrogen regulation 40 65 128 13 152 173 193 199

Nuclear movement 53 58 72 74 133 143 151 154 164 175 200

Nucleolar protein 176

Onychomycosis 138

Ornithine decarboxylase 17

Osmotic stress 59

Osmotin 39

Overlapping genes 65

Oxidative damage protection 94

Pathogen identification 1 127 159

Pathogenicity 17 32 75 84 94 104 138

Paxillene 204

Pectate lyase 24

Penicillin 11 50 120128 180 199

Peroxisomes 7

pH signalling 48 49 55 56 128 133 163 187 193

pH-dependent transport 209

Phosphatase isoforms 145

Photodimer splitting 35

Photolyase 35

Physical map 6 78 79 119 156 160

Plant wall degradation 157

Plasma membrane ATPase 2

Plasmid integration 18

Plasmid replication 112 160

Polarity 134 148

Polpypoidization 177

Potassium dependence 73

Poultry 104

Proline transporter 185

Promoter analysis 55 65 93 128 129 147 168 193 199

Promoter, strong 207

Propionate metabolism 31

Proteases 103 193

Protein crystalization 140

Protein domain structure 56 116

Protein evolution 139

Protein kinases 99 170

Protein phosphatase 109

Protein production modelling 3

Protein secretion 106 158

Protein sorting 184 202

Proteolytic activation 56

Pulse field electrophoresis 125 160

Purine transporter 14 132 189

Putrescine biosynthesis 17

Pyrithiamine resistance 111

Quinate induction 116

RACE 169

RAPD typing 208

Reactive oxygen species 94

Recombination 192

Recombinogenic substances 19

Relative heterothallism 88

REMI 166

Replicating plasmids 160

Replication cue elements 112

Rhamnosidase 124

Ribosomal gene spacers 84 127 159 195

Ribosomal proteins 96 97

Ribosome inactivating protein 141

RIP-like activity 142

5.8S rRNA 195

S-adenosylmethionine decarboxylase 90

Salt stress 25

SEC4 homologue 158

Secondary metabolism 180

Self-splicing intron 70

Septal pores 101 186

Septation 101 130 131 134 135

Septins 135

Sequence similarity 139

Serine O-acetyltransferase 76

Serine protease 193

Serine protein kinase 196

Sexual reproduction 27 34 74 82 88 89 96 97 114 150 178

Signal recognition 116

Signature-tagged mutagenesis 32

Single strand conformational polymorphism 159

Site-directed mutagenesis 32 120

SKP1 protein family 153

Spitzenkörper 61

Stabilization of integrants 18

Step-out PCR 169

Sterigmatocystin 37 87 107 180

Sterigmatocystin O-methyltransferase 118

Stress-induced enzymes 157

Substrate binding 120

Sulphate assimilation 167

Sulphur regulation 153

Superoxide dismutase 146

Suppressors 41 63

Taka amylase A 182

Taxonomy 71 84 127 195 203 208

Template switching 169

Tetrad analysis 88

Thiamine biosynthesis 111

Topoisomerase 33

Toxic efflux 46

Toxicity resistance 10

Transcription factors 49 133 148 181 183

Transformation 27 42 92 111 137 160

Translation in germination 149

Translational repression 47

Translocation mutant 87

Transport-related functions 157

Transporters 132

Transposon insertion 144 197

Transposons 117 142

Trichostatin 73

Tryptophan synthetase 52

Ubiquitin processing protease 119

Vacuolar membrane ATPase 52

Vacuoles 184

Vesicle trafficking 61

WD40 repeat protein 86

Woronin bodies 186

Xanthine dehydrogenase 8

Xylanase 147

Zinc finger proteins 49 82 123 126 168 183 205

Fungi

abaA 26^c

abcA-D 46

acuD 30

acuH 43

alcA 3

alcB 98

alcR 62 126 129

aldA 62

amdR 55

amdS 55

amrY 183

ancop 115^s

apsA 74^c

apsA,B 175

areA 123 136 152

areB 40^s

argB 92

aromA 139

aroF 83^s

aroG 83^s

aspA-E 135^s

atrA-D 46

atrA-G 9

atrB 10

atrC,D 11^s

bcnA 151

bimD 192

catB 36

catC 105^s

chsA,C 68

cmkB 99^s

cmkC 99^s

cobA (AnCoB) 70

cpcB 89^s

creA 4 22 98 129 147 188 196^c

creB 119^s

crnA 209^sh

cysA 76^s

dopA 150^s

dsgA 41

fadA 39 180

fluG 41

fmdS 65^s

gabA 55

gfdA 59^s

gtaA 108^s

hap 102

hapB 174

hapC 128 182^ch

hexA 186^c

hfa 91

hisB 34^s

hisHF 190^s

hmgA 162

hosA 73^s

hurA 91

hxB 8^s

hypA 101 169

intA 55

lsdA 114^s

lysF 199

malA 183

mccA,B 69^s

mclA 31

medA 144^c

msdA-C 51^s

nimA 45 66^c 177^h

nimX 130

nsdD 96 97

nud 175

nudA 201

nudC 72^c

nudE 53^s 58^c 143^c 164^c 200

nudF 5 53 58^c 81 143^c 164^c

nudG 20^c

nudK 201

pac 48

pacA 100 145

pacC 49 55 56 133

pal 48

palF,H 187

pcbAB 128

pcbC 128

pclA 166^s

pkaA 170^s

podG,H 148^s

pphA 109^s

prnA 154

prnB 185

prtA,B 193

puA 17 20

pyrG 100

qutA 139

qutR 116

rasA 149

rcoA 86^s

recQ 13

rpdA 73^s

rpl3 96^s 97^s

rpl37 96^s

sA,C 167^c

scaA 33

sconC ^s 153

sepA 131

sfaD 39

sgdA-H 149

snxA-D 130

sodA 146^s

sod^IVC 115^s

stcG 37^c

stcO 206

stcP 206^c

stcW 87

steA 27^e

suO 63

tcsA 12^s

tilA 165

treA 38

trpB 52^s

uapA 132

uapC 189

usgS 65^s

uvsC 92

veA 96 97

vmaB 52

vpsA 184

wA 67 94 198^h

xlnB 147

xprF 103^s

xprG 103

arabinase 172

avfA 206

omtB 206

alb1 198^h

FKS1 23^s

FOS-1 155^s

paba 32

pksP 94

RHO1 23^s

bphA 191

cprA 191^s

plyA 24^s

pmrA 202

srgA-E 158

glaB 93

gtaA 108^s

hapB,C,E 181^se

hapC 182^se

hemA 54^s

ketoacyl-CoA thiolase 161^s

pg/pi-tp 161^s

ptrA 111^st

tamA 173^se

adhA 37

avfA 206

fluP 210

glcA 205^s

hxtA 205^s

nadA 205^s

omtA 118

omtB 206

sugA 205^s

avfA 206

omtA 206

fructosyltransferase 85^s

sAT,CT 167^e

cre1 95

mecB 125^s

pacC 168^s

pcbC 168

creA 188^se

gdhA 160

manganese peroxidase 113^e

Nrf1 152

creA 188^se

arg-2 47

hex-1 186^s

spe-2 90

ro-11 53^c

nre 207

xylP 207^e

abaA 26

cflA 28^s

stlA 27^s

manganese peroxidase 113^e

ami1 74^s

CGR1 176

CPA1 47

rim9 49

SPO76^c 192^c

cre1 196

pac1 163

pyrG 171^e

ODC 17^e

nifS 8^c

LC8 20^c

ma-1 8^c

prpB 31^c

c-Jun 89

hnudC 72

LIS1 5 53 58 164 200

NUDEL 143^c 164^c

RACK-1 89

Mouse

mNudE^c 58

X-Nek2B 66

Lpe1 14^e

Aspergillus section Circumdati 195

Aspergillus section Nigri 203

A. flavus 1

A. flavus 15 71 118 127 141 159 208

A. fumigatus 1 15 21 77 127 134 146 159 208

A. japonicus 80

A. niger 1 15 48 106 127 159 179 208

A. ochraceoroseus 107

A. oryzae 71 112 118 198^e

A. tamarii 107

A. terreus 1 15 159 208

A. versicolor 118 127

Botrytis cinerea 160

Candida albicans 48

Fusarium oxysporium 137

Fusarium sporotichioides 180

Magnaporthe grisea 197

Neurospora crassa 29

Penicillium chrysogenum 48 128

Penicillium nalgiovense 128

Penicillium paxilli 204

Pleurotus eryngii 194

Podospora anserina 16

Saccharomyces cerevisiae 29 48 187

Yarrowia lipolytica 48 187

Actinoplanes utahensis 110

Agrobacterium tumefaciens 137

Lactobacillus coryniformis 122

Xenopus laevis 209^h

Zea mays 141