Neurospora Bibliography
This bibliography represents my attempt to collect all works dealing substantially with Neurospora. Please let me know of anything published in 2001 or 2002 that is not included here or in the previous bibliography, so that it might be mentioned next year. I would be especially happy to hear of chapters from books, and articles from journals not indexed in major bibliographic services. Please also let me know of any errors in citation. Please send reprints or copies of articles to the Fungal Genetics Stock Center.
Craig Wilson, 15236 Ashworth Ave. N., Shoreline WA 98133, USA (chwilson@blarg.net)
1. Adams, D. L. 2002. Characterization of osmotic sensitivity of os-9 and os-11 mutants of Neurospora crassa. Thesis (M.S.)--Georgia Southern University. viii, 35 p.
2. Adhvaryu, K. K., and R. Maheshwari. 2002. Heterogeneity in NTS of rDNA in localized populations of Neurospora. Curr. Sci. 82:1015-1020.
3. Adhvaryu, K. K., S. Sultana, S. SundarRaj, and R. Maheshwari. 2001. A simple method to determine mating type in Neurospora discreta. Fungal Genet. Newslett. 48:4-6.
4. Andersen, A. M. A. 2001. Rearrangement of a stable secondary structure during tertiary folding of the Neurospora VS ribozyme. Thesis (Ph. D.)--University of Toronto. 136 pg.
5. Arrach, N., T. J. Schmidhauser, and J. Avalos. 2002. Mutants of the carotene cyclase domain of al-2 from Neurospora crassa. Mol. Genet. Genomics 266:914-921.
6. Aslanidi, K. B., A. G. Pogorelov, V. Aslanidi, A. Mornev, and G. G. Sahakyan. 2001. Potassium gradients in the growing hyphae of Neurospora crassa. Membr Cell Biol 14:487-495.
7. Barstead, R. 2001. Genome-wide RNAi. Curr. Opin. Chem. Biol. 5:63-66.
8. Bell, P. D., S. K. Crosthwaite, P. L. Lakin-Thomas, M. Merrow, and M. Okland. 2001. The Neurospora circadian clock: Simple or complex? Philos. Trans. R. Soc. Lond. Ser. B-Biol. Sci. 356:1697-1709.
9. Bell-Pedersen, D. 2002. Circadian rhythms in Neurospora crassa. In: Molecular biology of fungal development. H.D Osiewacz (ed.). Marcel Dekker, New York. pp. 187-214.
10. Bell-Pedersen, D., Z. A. Lewis, J. J. Loros, and J. C. Dunlap. 2001. The Neurospora circadian clock regulates a transcription factor that controls rhythmic expression of the output eas(ccg-2) gene. Mol. Microbiol. 41:897-909.
11. Belozerskaya, T. A. 2001. Fungal hydrophobins: structure and function. Mikol. Fitopatol. 35:3-11.
12. Benito, B., B. Garciadeblas, and N. A. Rodriguez. 2002. Potassium- or sodium-efflux ATPase, a key enzyme in the evolution of fungi. Microbiology 148:933-941.
13. Bennett, J. W., and J. Arnold. 2001. Genomics for fungi. In: The Mycota VIII. Biology of the fungal cell. R. J. Howard and N. A. R. Gow (eds.). Springer-Verlag, Berlin. pp. 267-297.
14. Bernstein, E., A. M. Denli, and G. J. Hannon. 2001. The rest is silence. RNA 7:1509-1521.
15. Bibbins, M., V. F. Crepin, N. J. Cummings, T. Mizote, K. Baker, K. H. Mellits, and I. F. Connerton. 2002. A regulator gene for acetate utilisation from Neurospora crassa. Mol. Genet. Genomics 267:498-505.
16. Bibillo, A., and T. H. Eickbush. 2002. The reverse transcriptase of the R2 non-LTR retrotransposon: Continuous synthesis of cDNA on non-continuous RNA templates. J. Mol. Biol. 316:459-473.
17. Bieszke, J. A. 2002. Characterization of the NOP-1 opsin photoreceptor in the filamentous fungus Neurospora crassa. Thesis (Ph. D.)--University of Texas Health Science Center. 203 pg.
18. Bird, A. 2001. Molecular biology: Methylation talk between histones and DNA. Science 294:2113-2115.
19. Bobrowicz, P., R. Pawlak, A. Correa, D. Bell-Pedersen, and D. J. Ebbole. 2002. The Neurospora crassa pheromone precursor genes are regulated by the mating type locus and the circadian clock. Mol. Microbiol. 45:795-804.
20. Bowman, B. J., and E. J. Bowman. 2002. Mutations in subunit c of the vacuolar ATPase confer resistance to bafilomycin and identify a conserved antibiotic binding site. J. Biol. Chem. 277:3965-3972.
21. Brown, L. S., A. K. Dioumaev, J. K. Lanyi, E. N. Spudich, and J. L. Spudich. 2001. Photochemical reaction cycle and proton transfers in Neurospora rhodopsin. J. Biol. Chem. 276:32495-32505.
22. Burgers, W. A., F. Fuks, and T. Kouzarides. 2002. DNA methyltransferases get connected to chromatin. Trends Genet. 18:275-277.
23. Casadio, R., I. Jacoboni, A. Messina, and V. De Pinto. 2002. A 3D model of the voltage-dependent anion channel (VDAC). FEBS Lett 520:1-7.
24. Catalanotto, C., G. Azzalin, G. Macino, and C. Cogoni. 2002. Involvement of small RNAs and role of the qde genes in the gene silencing pathway in Neurospora. Genes Dev. 16:790-795.
25. Cathcart, H. M. 2002. Characterization and genetic analysis of the morphological mutant crisp-5 of Neurospora crassa. Thesis (M.S.)--Georgia Southern University. xii, 73 p.
26. Chen, W. 2001. Generation of new colonial mutants in Neurospora crassa using insertional mutagenesis. Thesis (M.Sc.)--Carleton University. 119 pg.
27. Cheng, P., Y. H. Yang, K. H. Gardner, and Y. Liu. 2002. PAS domain-mediated WC-1/WC-2 interaction is essential for maintaining the steady-state level of WC-1 and the function of both proteins in circadian clock and light responses of Neurospora. Mol. Cell. Biol. 22:517-524.
28. Chicas, A., and G. Macino. 2001. Characteristics of post-transcriptional gene silencing. EMBO Rep. 2:992-996.
29. Clarke, M. S. 2001. Database-driven website development for the Neurospora crassa gene compendium using PHP and MySQL. Thesis (M.Res.)--University of Leeds. 93 pg.
30. Cogoni, C. 2001. Homology-dependent gene silencing mechanisms in fungi. Annu. Rev. Microbiol. 55:381-406.
31. Cogoni, C. 2002. Unifying homology effects. Nat. Genet. 30:245-246.
32. Collett, M. A., N. Garceau, J. C. Dunlap, and J. J. Loros. 2002. Light and clock expression of the Neurospora clock gene frequency is differentially driven by but dependent on WHITE COLLAR-2. Genetics 160:149-158.
33. Collett, M. A., J. J. Loros, and J. C. Dunlap. 2001. The Clock affecting 1 mutation of Neurospora is a recurrence of the frq7 mutation. Fungal Genet. Newslett. 48:7-9.
34. Correa, A., and D. Bell-Pedersen . 2002. Distinct signaling pathways from the circadian clock participate in regulation of rhythmic conidiospore development in Neurospora crassa. Eukaryotic Cell 1:273-280.
35. Cross, R. A. 2001. Molecular motors: Kinesin's string variable. Curr. Biol. 11:R147-R149.
36. Davis, R. H. 2001. The fungi in century 21. The XXI Fungal Genetics Conference Pacific Grove, California, March 13-18, 2001. Fungal Genet. Biol. 33:145-154.
37. Davis, R. H., and D. D. Perkins. 2002. Neurospora: a model of model microbes. Nat. Rev. Genet. 3:397-403.
38. De Backer, M. D., M. Raponi, and G. M. Arndt. 2002. RNA-mediated gene silencing in non-pathogenic and pathogenic fungi. Curr. Opin. Microbiol. 5:323-329.
39. de Paula, R., C. Azzariti de Pinho, H. F. Terenzi, and M. C. Bertolini. 2002. Molecular and biochemical characterization of the Neurospora crassa glycogen synthase encoded by the gsn cDNA. Mol. Genet. Genomics 267:241-253.
40. Dettman, J. R., F. M. Harbinski, and J. W. Taylor. 2001. Ascospore morphology is a poor predictor of the phylogenetic relationships of Neurospora and Gelasinospora. Fungal Genet. Biol. 34:49-61.
41. Dev, K., and R. Maheshwari. 2001. Use of mutant mcm strain in purification of Neurospora crassa transformants resistant to hygromycin. Fungal Genet. Newslett. 48:10-11
42. Dev, K., and R. Maheshwari. 2002. Transformation in heterokaryons of Neurospora crassa is nuclear rather than cellular phenomenon. Curr. Microbiol. 44:309-313.
43. Dever, T. E. 2002. Gene-specific regulation by general translation factors. Cell 108:545-556.
44. Devlin, P. F. 2002. Signs of the time: environmental input to the circadian clock. J. Exp. Bot. 53:1535-1550.
45. Diaz, A., P. Rangel, Y. Montes de Oca, F. Lledias, and W. Hansberg. 2001. Molecular and kinetic study of catalase-1, a durable large catalase of Neurospora crassa. Free Radic. Biol. Med. 31:1323-1333.
46. Diekert, K., A. I. de Kroon, U. Ahting, B. Niggemeyer, W. Neupert, B. de Kruijff, and R. Lill. 2001. Apocytochrome c requires the TOM complex for translocation across the mitochondrial outer membrane. EMBO J. 20:5626-5635.
47. Doetsch, P. W., B. Kaur, and A. M. Avery. 2002. Broad specificity DNA damage endonuclease. United States Patent: 6,368,594.
48. Dolan, P. L., Y. Wu, L. K. Ista, R. L. Metzenberg, M. A. Nelson, and G. P. Lopez. 2001. Robust and efficient synthetic method for forming DNA microarrays. Nucleic Acids Res. 29:art. no.-e107. (nar.oupjournals.org/cgi/reprint/29/21/e107)
49. Dragovic, Z., Y. Tan, M. Gorl, T. Roenneberg, and M. Merrow. 2002. Light reception and circadian behavior in 'blind' and 'clock- less' mutants of Neurospora crassa. EMBO J. 21:3643-3651.
50. Duarte, M., H. Populo, A. Videira, T. Friedrich, and U. Schulte. 2002. Disruption of iron-sulphur cluster N2 from NADH : ubiquinone oxidoreductase by site-directed mutagenesis. Biochem. J. 364:833-839.
51. Dvorachek, W. H., P. L. Dolan, M. A. Nelson, and D. O. Natvig. 2001. A provisional UniGene clone set based on ESTs from Neurospora crassa. Fungal Genet. Newslett. 48:12.
52. Fang, P., C. Wu, and M. S. Sachs. 2002. Neurospora crassa supersuppressor mutants are amber codon-specific. Fungal Genet. Biol. 36:167-175.
53. Fehmer, M., A. Bhat, F. K. Noubissi, and D. P. Kasbekar. 2001. Wild-isolated Neurospora crassa strains that increase fertility of crosses with segmental aneuploids used to establish that a large duplication suppresses RIP in a smaller duplication. Fungal Genet. Newslett. 48:13-14.
54. Finnegan, E. J., M. B. Wang, and P. Waterhouse. 2001. Gene silencing: fleshing out the bones. Curr. Biol. 11:R99-R102.
55. Freitag, M., L. M. Ciuffetti, and E. U. Selker. 2001. Expression and visualization of Green Fluorescent Protein (GFP) in Neurospora crassa. Fungal Genet. Newslett. 48:15-19.
56. Freitag, M., R. L. Williams, G. O. Kothe, and E. U. Selker. 2002. A cytosine methyltransferase homologue is essential for repeat- induced point mutation in Neurospora crassa. Proc. Natl. Acad. Sci. U.S.A. 99:8802-8807.
57. Froehlich, A. C., Y. Liu, J. J. Loros, and J. C. Dunlap. 2002. White collar-1, a circadian blue light photoreceptor, binding to the frequency promoter. Science 297:815-819.
58. Fuchs, F., H. Prokisch, W. Neupert, and B. Westermann. 2002. Interaction of mitochondria with microtubules in the filamentous fungus Neurospora crassa. J. Cell Sci. 115:1931-1937.
59. Fujitani, Y., S. Mori, and I. Kobayashi. 2002. A reaction-diffusion model for interference in meiotic crossing over. Genetics 161:365-372.
60. Gaba, A., Z. Wang, T. Krishnamoorthy, A. G. Hinnebusch, and M. S. Sachs. 2001. Physical evidence for distinct mechanisms of translational control by upstream open reading frames. EMBO J. 20:6453-6463.
61. Galbraith, J. B. 2001. Searching for coding regions in Neurospora crassa using codon bias and consensus sequences. Thesis (M.S.)--University of New Mexico. xii, 53 pg.
62. Gessler, N. N., A. V. Sokolov, V. Y. Bykhovsky, and T. A. Belozerskaya. 2002. Superoxide dismutase and catalase activities in carotenoid- synthesizing fungi Blakeslea trispora and Neurospora crassa fungi in oxidative stress. Appl. Biochem. Microbiol. 38:205-209.
63. Gilbert, S. P. 2001. High-performance fungal motors. Nature 414:597-598.
64. Glass, N. L. and S. J. Saupe 2002. Vegetative incompatibility in filamentous ascomycetes. In: Molecular biology of fungal development. H.D Osiewacz (ed.). Marcel Dekker, New York. pg. 109-131.
65. Goldman, G. H., S. L. McGuire, and S. D. Harris. 2002. The DNA damage response in filamentous fungi. Fungal Genet. Biol. 35:183-195.
66. Goll, M. G., and T. H. Bestor. 2002. Histone modification and replacement in chromatin activation. Genes Dev. 16:1739-1742.
67. Gonze, D., J. Halloy, and A. Goldbeter. 2002. Robustness of circadian rhythms with respect to molecular noise. Proc. Natl. Acad. Sci. U.S.A. 99:673-678.
68. Gorl, M., M. Merrow, B. Huttner, J. Johnson, T. Roenneberg, and M. Brunner. 2001. A PEST-like element in FREQUENCY determines the length of the circadian period in Neurospora crassa. EMBO J. 20:7074-7084.
69. Gupta, G. D., and I. B. Heath. 2002. Predicting the distribution, conservation, and functions of SNAREs and related proteins in fungi. Fungal Genet. Biol. 36:1-21.
70. Hammond, S. M., S. Boettcher, A. A. Caudy, R. Kobayashi, and G. J. Hannon. 2001. Argonaute2, a link between genetic and biochemical analyses of RNAi. Science 293:1146-1150.
71. Hannon, G. J. 2002. RNA interference. Nature 418:244-251.
72. Harmer, S. L., S. Panda, and S. A. Kay. 2001. Molecular bases of circadian rhythms. Annu. Rev. Cell Dev. Biol. 17:215-253.
73. Harrison, K. A. 2002. Characterization of SRE, a gata factor which negatively regulates siderophore synthesis in Neurospora crassa. Thesis (Ph. D.)--Ohio State University. xv, 159 pg.
74. Hays, S. M. 2001. Characterization of the histone genes, the N-terminus of H4, and the methylation mutant DIM-3 of Neurospora crassa. Thesis (Ph. D.)--University of Oregon. xvi, 174 pg.
75. Hays, S. M., J. Swanson, and E. U. Selker. 2002. Identification and characterization of the genes encoding the core histones and histone variants of Neurospora crassa. Genetics 160:961-973.
76. He, Q., P. Cheng, Y. Yang, L. Wang, K. H. Gardner, and Y. Liu. 2002. White collar-1, a DNA binding transcription factor and a light sensor. Science 297:840-843.
77. Heath, I. B. 2001. Bridging the divide: Cytoskeleton-plasma membrane-cell wall interactions in growth and development. In: The Mycota VIII. Biology of the fungal cell. R. J. Howard and N. A. R. Gow (eds.). Springer-Verlag, Berlin. pp. 201-224
78. Hiley, S. L., and R. A. Collins. 2001. Rapid formation of a solvent-inaccessible core in the Neurospora Varkud satellite ribozyme. EMBO J. 20:5461-5469.
79. Huang, Y., J. Wang, G. Li, Z. Zheng, and W. Su. 2001. Antitumor and antifungal activities in endophytic fungi isolated from pharmaceutical plants Taxus mairei, Cephalataxus fortunei and Torreya grandis. FEMS Immunol. Med. Microbiol. 31:163-167.
80. Hutvagner, G., and P. D. Zamore. 2002. RNAi: Nature abhors a double-strand. Curr. Opin. Genet. Dev. 12:225-232.
81. Inagaki, Y., C. Blouin, W. F. Doolittle, and A. J. Roger. 2002. Convergence and constraint in eukaryotic release factor 1 (eRF1) domain 1: The evolution of stop codon specificity. Nucleic Acids Res. 30:532-544.
82. Isakova, E. P., L. V. Gorpenko, E. I. Shurubor, T. A. Belozerskaya, and R. A. Zvyagilskaya. 2002. Isolation and characterization of tightly coupled mitochondria from wild type and nap mutant Neurospora crassa. Biochem.-Moscow 67:260-264.
83. Jacobsen, S., M. Wittig, and S. Poggeler. 2002. Interaction between mating-type proteins from the homothallic fungus Sordaria macrospora. Curr. Genet. 41:150-158.
84. Jones, F. D., S. P. Ryder, and S. A. Strobel. 2001. An efficient ligation reaction promoted by a Varkud Satellite ribozyme with extended 5'- and 3'-termini. Nucleic Acids Res. 29:5115-5120.
85. Kajander, T., M. C. Merckel, A. Thompson, A. M. Deacon, P. Mazur, J. W. Kozarich, and A. Goldman. 2002. The structure of Neurospora crassa 3-carboxy-cis,cis-muconate lactonizing enzyme, a beta propeller cycloisomerase. Structure 10:483-492.
86. Kallipolitou, A., D. Deluca, U. Majdic, S. Lakamper, R. Cross, E. Meyhofer, L. Moroder, M. Schliwa, and G. Woehlke. 2001. Unusual properties of the fungal conventional kinesin neck domain from Neurospora crassa. EMBO J. 20:6226-6235.
87. Kapoor, M., C. A. Curle, S. Kalia, and Y. Achari. 2002. Minimal promoter for the NAD(+)-specific glutamate dehydrogenase gene of Neurospora crassa. Biochem. Cell Biol. 80:177-188.
88. Kasbekar, D. P. 2001. The Neurospora compendium: chromosomal loci, by David D. Perkins, Alan Radford and Matthew S. Sachs. J. Genet. 80:53-54.
89. Kim, H. 2001. Molecular and functional analyses of two novel Neurospora crassa genes involved in the mating response pathway. Thesis (Ph. D.)--University of New Mexico. xi, 91 pg.
90. Kitzing, K., P. Macheroux, and N. Amrhein. 2001. Spectroscopic and kinetic characterization of the bifunctional chorismate synthase from Neurospora crassa. evidence for a common binding site for 5-enolpyruvylshikimate 3-phosphate and NADPH. J. Biol. Chem. 276:42658-42666.
91. Klanner, C., H. Prokisch, and T. Langer. 2001. MAP-1 and IAP-1, two novel AAA proteases with catalytic sites on opposite membrane surfaces in mitochondrial inner membrane of Neurospora crassa. Mol. Biol. Cell 12:2858-2869.
92. Kortum, K. 2001. The genetics of circadian rhythms in Neurospora crassa : do multiple oscillators exist? Thesis (Fellows Thesis)--Texas A & M University. v, 21 pg.
93. Kouzarides, T. 2002. Histone methylation in transcriptional control. Curr. Opin. Genet. Dev. 12:198-209.
94. Kraemer, E., J. Wang, J. H. Guo, S. Hopkins, and J. Arnold. 2001. An analysis of gene-finding programs for Neurospora crassa. Bioinformatics 17:901-912.
95. Kritsky, M. S., S. Filippovich, T. P. Afanasieva, G. P. Bachurina, and V. E. A. Russo. 2001. The involvement of photoregulated DNA methylation into a choice between sexual and asexual developmental pathways in Neurospora crassa. Dokl. Biochem. Biophys. 378:203-205.
96. Kritsky, M. S., S. Y. Filippovich, T. P. Afanasieva, G. P. Bachurina, and V. E. A. Russo. 2001. Effect of inhibitors of enzymatic DNA methylation on the formation of reproductive structures and carotenoid production in Neurospora crassa. Appl. Biochem. Microbiol. 37:243-247.
97. Kritsky, M. S., V. E. A. Russo, S. Y. Filippovich, T. P. Afanasieva, and G. P. Bachurina. 2002. The opposed effect of 5-azacytidine and light on the development of reproductive structures in Neurospora crassa. Photochem. Photobiol. 75:79-83.
98. Krokowski, D., M. Tchorzewski, and N. Grankowski. 2002. Cloning and characterization of the gene encoding ribosomal P0 phosphoprotein from Neurospora crassa. Acta Biochim. Pol. 49:11-18.
99. Kruger, D. 2002. Bitte funf Pilz! Experiment zur EIN-GEN-EIN-POLYPEPTID-Hypothese mit Neurospora crassa. Praxis Der Naturwissenschaften Biologie in Der Schule 51:34-39.
100. Kumar, S., Y. Zhou, and M. Plamann. 2001. Dynactin-membrane interaction is regulated by the C-terminal domains of p150(Glued). EMBO Rep. 2:939-944.
101. Lachner, M. 2002. Epigenetics: SUPERMAN dresses up. Curr. Biol. 12:R434-436.
102. Lachner, M., and T. Jenuwein. 2002. The many faces of histone lysine methylation. Curr. Opin. Cell Biol. 14:286-298.
103. Lafontaine, D. A., T. J. Wilson, D. G. Norman, and D. M. J. Lilley. 2001. The A730 loop is an important component of the active site of the VS ribozyme. J. Mol. Biol. 312:663-674.
104. Lakin-Thomas, P. L., V. D. Gooch, and M. Ramsdale. 2001. Rhythms of differentiation and diacylglycerol in Neurospora. Philos. Trans. R. Soc. Lond. Ser. B-Biol. Sci. 356:1711-1715.
105. Lamberty, M., A. Caille, C. Landon, M. S. Tassin, C. Hetru, P. Bulet, and F. Vovelle. 2001. Solution structures of the antifungal heliomicin and a selected variant with both antibacterial and antifungal activities. Biochemistry 40:11995-12003.
106. Lee, I. H., and M. Plamann. 2001. Microtubules and molecular motors. In: The Mycota VIII. Biology of the fungal cell. R. J. Howard and N. A. R. Gow (eds.). Springer-Verlag, Berlin. pp. 225-241.
107. Levadny, V., M. Colombini, X. X. Li, and V. M. Aguilella. 2002. Electrostatics explains the shift in VDAC gating with salt activity gradient. Biophys J. 82:1773-1783.
108. Levina, N. N., A. Y. Dunina-Barkovskaya, S. Shabala, and R. R. Lew. 2002. Blue light modulation of ion transport in the slime mutant of Neurospora crassa. J. Membr. Biol. 188:213-226.
109. Lewis, Z. A., A. Correa, C. Schwerdtfeger, K. L. Link, X. Xie, R. H. Gomer, T. Thomas, D. J. Ebbole, and D. Bell-Pedersen. 2002. Overexpression of White Collar-1 (WC-1) activates circadian clock-associated genes, but is not sufficient to induce most light-regulated gene expression in Neurospora crassa. Mol. Microbiol. 45:917-931.
110. Linden, H. 2002. Circadian rhythms: A white collar protein senses blue light. Science 297:777-778.
111. Linden, H. 2002. Blue light perception and signal transduction in Neurospora crassa. In: Molecular biology of fungal development. H.D Osiewacz (ed.). Marcel Dekker, New York. pp. 165-185
112. Luke, A. K., and S. G. Burton. 2001. A novel application for Neurospora crassa: Progress from batch culture to a membrane bioreactor for the bioremediation of phenols. Enzyme Microb. Technol. 29:348-356.
113. Marek, S. M. 2001. Programmed cell death in fungi and the etiology of cold storage canker of almond and other trees. Thesis (Ph. D.)-- University of California, Davis. 197 pg..
114. Martienssen, R. A., and V. Colot. 2001. DNA methylation and epigenetic inheritance in plants and filamentous fungi. Science 293:1070-1074.
115. Masloff, S., S. Jacobsen, S. Poggeler, and U. Kuck. 2002. Functional analysis of the C-6 zinc finger gene pro1 involved in fungal sexual development. Fungal Genet. Biol. 36:107-116.
116. Merckel, M. C., T. Kajander, A. M. Deacon, A. Thompson, J. G. Grossmann, N. Kalkkinen, and A. Goldman. 2002. 3-Carboxy-cis,cis-muconate lactonizing enzyme from Neurospora crassa: MAD phasing with 80 selenomethionines. Acta Crystallogr. Sect. D-Biol. Crystallogr. 58:727-734.
117. Mewes, H. W., D. Frishman, U. Gueldener, G. Mannhaupt, K. Mayer, M. Mokrejs, B. Morgenstern, M. Muensterkoetter, S. Rudd, and B. Weil. 2002. MIPS: A database for genomes and protein sequences. Nucleic Acids Res. 30:31-34.
118. Michan, S., Lledi, F. as, J. Baldwin, D. Natvig, and W. Hansberg. 2002. Regulation and oxidation of two large monofunctional catalases. Free Radic. Biol. Med. 33:521-532.
119. Miller, T. K., S. Renault, and C. P. Selitrennikoff. 2002. Molecular dissection of alleles of the osmotic-1 locus of Neurospora crassa. Fungal Genet. Biol. 35:147-155.
120. Model, K., T. Prinz, T. Ruiz, M. Radermacher, T. Krimmer, W. Kuhlbrandt, N. Pfanner, and C. Meisinger. 2002. Protein translocase of the outer mitochondrial membrane: Role of import receptors in the structural organization of the TOM complex. J. Mol. Biol. 316:657-666.
121. Moenne, A. 2001. Eucaryotic metallothioneins: proteins, gene regulation and copper homeostasis. Cah. Biol. Mar. 42:125-135.
122. Mohr, S., J. M. Stryker, and A. M. Lambowitz. 2002. A DEAD-box protein functions as an ATP-dependent RNA chaperone in group I intron splicing. Cell 109:769-779.
123. Monnerjahn, C., D. Techel, U. Meyer, and L. Rensing. 2001. The grp78 promoter of Neurospora crassa: constitutive, stress and differentiation-dependent protein-binding patterns. Curr. Genet. 39:319-326.
124. Morgan, L. W., and J. F. Feldman. 2001. Epistatic and synergistic interactions between circadian clock mutations in Neurospora crassa. Genetics 159:537-543.
125. Morgan, L. W., J. F. Feldman, and D. Bell-Pedersen. 2001. Genetic interactions between clock mutations in Neurospora crassa: can they help us to understand complexity? Philos. Trans. R. Soc. Lond. Ser. B-Biol. Sci. 356:1717-1724.
126. Muirhead, C. A., N. L. Glass, and M. Slatkin. 2002. Multilocus self-recognition systems in fungi as a cause of trans-species polymorphism. Genetics 161:633-641.
127. Myers, C. A., B. Kuhla, S. Cusack, and A. M. Lambowitz. 2002. tRNA-like recognition of group I introns by a tyrosyl-tRNA synthetase. Proc. Natl. Acad. Sci. U.S.A. 99:2630-2635.
128. Nargang, F. E., M. Preuss, W. Neupert, and J. M. Herrmann. 2002. The Oxa1 protein forms a homooligomeric complex and is an essential part of the mitochondrial export translocase in Neurospora crassa. J. Biol. Chem. 277:12846-12853.
129. Noubissi, F. K., K. Aparna, K. McCluskey, and D. P. Kasbekar. 2001. Evidence for dominant suppression of repeat-induced point mutation (RIP) in crosses with the wild-isolated Neurospora crassa strains Sugartown and Adiopodoume-7. J. Genet. 80:55-61.
130. Nout, M. J. R., and K. E. Aidoo. 2002. Asian fungal fermented food. In: The Mycota X. Industrial Applications. H. D. Osiewacz (ed.), Springer-Verlag, Heidelberg. pp. 23-47.
131. Nozawa, S. R., G. Thedei, P. Ciancaglini, and A. Rossi. 2002. The adaptive response to ambient pH in Neurospora crassa - Contribution of a model organism to the elucidation of gene expression in eukaryotes. Biochem. Mol. Biol. Educ. 30:192-195.
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133. Nussberger, S., and W. Neupert. 2001. Protein translocation across the outer membrane of mitochondria: structure and function of the TOM complex of Neurospora crassa. NATO ASI Series 3 High Technology 87:67-84.
134. Olsen, I., and E. Jantzen. 2001. Sphingolipids in bacteria and fungi. Anaerobe 7:103-112.
135. Olsson, S. 2001. Colonial growth of fungi. In: The Mycota VIII. Biology of the fungal cell. R. J. Howard and N. A. R. Gow (eds.). Springer-Verlag, Berlin. pp. 125-141.
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137. Otto, S. P., and P. Yong. 2002. The evolution of gene duplicates. Adv. Genet. 46:451-483.
138. Oyama, S., Y. Yamagata, K. Abe, and T. Nakajima. 2002. Cloning and expression of an endo-1,6-beta-D-glucanase gene (neg1) from Neurospora crassa. Biosci. Biotechnol. Biochem. 66:1378-1381.
139. Paschen, S. A., and W. Neupert. 2001. Protein import into mitochondria. IUBMB Life 52:101-112.
140. Penalva, M. A. 2001. A fungal perspective on human inborn errors of metabolism: alkaptonuria and beyond. Fungal Genet. Biol. 34:1-10.
141. Peraza, L., and W. Hansberg. 2002. Neurospora crassa catalases, singlet oxygen and cell differentiation. Biol. Chem. 383:569-575.
142. Pickford, A. S., C. Catalanotto, C. Cogoni, and G. Macino. 2002. Quelling in Neurospora crassa. Adv. Genet. 46:277-303.
143. Poggeler, S. 2001. Mating-type genes for classical strain improvements of ascomycetes. Appl. Microbiol. Biotechnol. 56:589-601.
144. Poggeler, S., and U. Kuck. 2001. Identification of transcriptionally expressed pheromone receptor genes in filamentous ascomycetes. Gene 280:9-17.
145. Potapova, T. V., L. J. Boytzova, A. V. Alexeevski, and V. V. Smoljaninov. 2001. The functional role of intercellular interactions at the Neurospora crassa hyphae: Influence of distant mycelium part on the tip growth. Biol. Membr. 18:389-394.
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148. Prakash, A., and D. P. Kasbekar. 2002. Genes encoding chimeras of Neurospora crassa erg-3 and human TM7SF2 proteins fail to complement Neurospora and yeast sterol C-14 reductase mutants. J. Biosci. 27:105-112.
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153. Raju, N. B. 2002. Spore killers: meiotic drive elements that distort genetic ratios. In: Molecular biology of fungal development. H.D Osiewacz (ed.). Marcel Dekker, New York. pp. 275-296
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157. Reveal, B. S. 2001. Molecular cloning and regulatory analysis of the cystathionine b-lyase and c-lyase genes in Neurospora crassa. Thesis (M.S.)--Wright State University. viii, 68 pg.
158. Rhee, K. H., G. A. Scarborough, and R. Henderson. 2002. Domain movements of plasma membrane H+-ATPase: 3D structures of two states by electron cryo-microscopy. EMBO J. 21:3582-3589.
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160. Richards, E. J., and S. C. R. Elgin. 2002. Epigenetic codes for heterochromatin formation and silencing: Rounding up the usual suspects. Cell 108:489-500.
161. Rodriguez, T. F., R. Tarrio, and F. J. Ayala. 2001. Xanthine dehydrogenase (XDH): episodic evolution of a "neutral" protein. J. Mol. Evol. 53:485-495.
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163. Roenneberg, T., and M. Merrow. 2001. Seasonality and photoperiodism in fungi. J. Biol. Rhythms 16:403-414.
164. Rostovtseva, T. K., A. Komarov, S. M. Bezrukov, and M. Colombini. 2002. VDAC channels differentiate between natural metabolites and synthetic molecules. J. Membr. Biol. 187:147-156.
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167. Ruoff, P., and I. Slewa. 2002. Circadian period lengths of lipid synthesis mutants (cel, chol-1) of Neurospora show defective temperature, but intact pH- compensation. Chronobiol. Int. 19:517-529.
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176. Shinohara, M. L., A. Correa, D. Bell-Pedersen, J. C. Dunlap, and J. J. Loros. 2002. Neurospora clock-controlled gene 9 (ccg-9) encodes trehalose synthase: Circadian regulation of stress responses and development. Eukaryotic Cell 1:33-43.
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181. Sood, V. D., and R. A. Collins. 2002. Identification of the catalytic subdomain of the VS ribozyme and evidence for remarkable sequence tolerance in the active site loop. J. Mol. Biol. 320:443-454.
182. Sood, V. D., S. Yekta, and R. A. Collins. 2002. The contribution of 2 '-hydroxyls to the cleavage activity of the Neurospora VS ribozyme. Nucleic Acids Res. 30:1132-1138.
183. Sverdlov, E. D. 2001. RNA interference: A novel mechanism of regulation of gene expression and a novel method of study of their functions. Bioorganicheskaya Khimiya 27:237-240.
184. Sweigard, J. A., and D. J. Ebbole. 2001. Functional analysis of pathogenicity genes in a genomics world. Curr. Opin. Microbiol. 4:387-392.
185. Swiegers, J. H., F. M. Vaz, I. S. Pretorius, R. J. Wanders, and F. F. Bauer. 2002. Carnitine biosynthesis in Neurospora crassa: identification of a cDNA coding for epsilon-N-trimethyllysine hydroxylase and its functional expression in Saccharomyces cerevisiae. FEMS Microbiol. Lett. 210:19-23.
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Neurospora Bibliography, Coauthor Index (first authors not included)
Abe, K. 138
Achari, Y. 87
Afanasieva, T. P. 95, 96, 97
Aguilella, V. M. 107
Ahting, U. 46
Aidoo, K. E. 130
Alexeevski, A. V. 145
Allis, C. D. 159
Amrani, N. 168
Amrhein, N. 90
Aparna, K. 129
Arndt, G. M. 38
Arnold, J. 13, 94
Aslanidi, V. 6
Avalos, J. 5
Avery, A. M. 47
Ayala, F. J. 161
Azzalin, G. 24
Azzariti de Pinho, C. 39
Bachurina, G. P. 95, 96, 97
Baker, K. 15
Baldwin, J. 118
Barbosa, J. E. 132
Bauer, F. F. 185
Becker, I. 174
Belk, J. 168
Bell-Pedersen, D. 19, 34, 109, 125, 176
Belozerskaya, T. A. 62, 82
Berry, D. R. 196
Bertolini, M. C. 39
Bestor, T. H. 66
Bezrukov, S. M. 164, 165
Bhat, A. 53
Blouin, C. 81
Boettcher, S. 70
Bowman, E. J. 20
Bowring, F. J. 154
Boytzova, L. J. 145
Brunner, M. 68
Bulet, P. 105
Burton, S. G. 112
Bykhovsky, V. Y. 62
Caille, A. 105
Catalanotto, C. 142
Catcheside, D. E. A. 154, 199, 206
Caudy, A. A. 70
Cheng, P. 76, 203, 204
Ciancaglini, P. 131
Ciuffetti, L. M. 55
Cogoni, C. 24, 142
Collins, R. A. 78, 180, 181, 182
Colombini, M. 107, 164, 165
Colot, V. 114
Connerton, I. F. 15
Correa, A. 19, 109, 176
Cottarel, G. 210
Crepin, V. F. 15
Cross, R. 86
Crosthwaite, S. K. 8
Crott, L. S. P. 132
Cummings, N. J. 15
Curle, C. A. 87
Cusack, S. 127
de Kroon, A. I. 46
de Kruijff, B. 46
De Pinto, V. 23
Deacon, A. M. 85, 116
Deluca, D. 86
Denli, A. M. 14
Dioumaev, A. K. 21
Djikeng, A. 191
Dolan, P. L. 51
Doolittle, W. F. 81
Duarte, M. 193
Dunina-Barkovskaya, A. Y. 108
Dunlap, J. C. 10, 32, 33, 57, 176, 200
Ebbole, D. J. 19, 109, 184
Eickbush, T. H. 16
Elgin, S. C. R. 160
Fang, P. 168
Feldman, J. F. 124, 125
Filippovich, S. Y. 95, 96, 97
Friedrich, T. 50
Frishman, D. 117
Fuks, F. 22
Gaba, A. 168
Ganesan, R. 168
Garceau, N. 32
Garciadeblas, B. 12
Gardner, K. H. 27, 76
Glass, N. L. 126, 201
Goldbeter, A. 67
Goldman, A. 85, 116
Gomer, R. H. 109
Gooch, V. D. 104
Gorl, M. 49
Gorpenko, L. V. 82
Grankowski, N. 98
Grossmann, J. G. 116
Gueldener, U. 117
Guo, J. H. 94
Halloy, J. 67
Hannon, G. J. 14, 70
Hansberg, W. 45, 118, 141
Harbinski, F. M. 40
Harris, S. D. 65
Hauck, K. 199
Heath, I. B. 69, 188, 189
Henderson, R. 158
Herrmann, J. M. 128
Hetru, C. 105
Hinnebusch, A. G. 60
Hoenger, A. 179
Holden, M. L. 197
Hopkins, S. 94
Huttner, B. 68
Inoue, H. 170
Ishii, C. 170
Ista, L. K. 48
Jacoboni, I. 23
Jacobsen, S. 115
Jacobson, A. 168
Jacobson, D. J. 169
Jantzen, E. 134
Jenuwein, T. 102
Johnson, J. 68
Kajander, T. 116
Kalia, S. 87
Kalkkinen, N. 116
Kasai, T. 172
Kasbekar, D. P. 53, 129, 148, 149
Kaur, B. 47
Kay, S. A. 72, 208
Kempken, F. 199
Kobayashi, I. 59, 70
Komarov, A. 164, 165
Kothe, G. O. 56
Kouzarides, T. 22
Kozarich, J. W. 85
Krebs, A. 179
Krimmer, T. 120
Krishnamoorthy, T. 60
Kuck, U. 115, 144, 199
Kuhla, B. 127
Kuhlbrandt, W. 120
Kumar, P. 178
Lakamper, S. 86
Lakin-Thomas, P. L. 8
Lam, S. 211
Lambowitz, A. M. 121, 127
Lamm, R. 211
Landon, C. 105
Langer, T. 91
Lanyi, J. K. 21
Lew, R. R. 108
Lewis, Z. A. 10
Li, G. 79
Li, X. X. 107
Lill, R. 46
Lilley, D. M. J. 103
Link, K. L. 109
Liu, Y. 27, 57, 76, 203, 204
Lledias, F. 45, 118
Lopez, G. P. 48
Loros, J. J. 10, 32, 33, 57, 176
Macheroux, P. 90
Macino, G. 24, 28, 142
Maheshwari, R. 2, 3, 41, 42
Majdic, U. 86
Mandelkow, E. 179
Mannella, C. A. 192
Mannhaupt, G. 117, 174
Marx, A. 179
Mayer, K. 117
Mazur, P. 85
McCluskey, K. 129
McGuire, S. L. 65
McIntyre, M. 196
McNeil, B. 196
Meisinger, C. 120
Mellits, K. H. 15
Merckel, M. C. 85
Merrow, M. 8, 49, 68, 162, 163
Messina, A. 23
Metzenberg, R. L. 48, 177
Mewes, H. W. 174
Meyer, U. 123
Meyhofer, E. 86
Misawa, N. 171
Mizote, T. 15
Mokrejs, M. 117
Montes de Oca, Y. 45
Morales, A. J. 210
Morgenstern, B. 117
Mori, S. 59
Mornev, A. 6
Moroder, L. 86
Mueller, J. 179
Muensterkoetter, M. 117
Nakajima, T. 138
Natvig, D. O. 51, 118, 169
Nelson, M. A. 48, 51
Neupert, W. 46, 58, 128, 133, 139
Niggemeyer, B. 46
Norman, D. G. 103
Noubissi, F. K. 53
Nussberger, S. 150
Okland, M. 8
Ottensmeyer, F. P. 189
Panda, S. 72
Pawlak, R. 19
Perkins, D. D. 37
Pfanner, N. 120, 155
Pillonel, C. 211
Plamann, M. 100, 106
Poggeler, S. 83, 115
Pogorelov, A. G. 6
Populo, H. 50
Pretorius, I. S. 185
Preuss, M. 128
Prinz, T. 120
Prokisch, H. 58, 91, 195
Radermacher, M. 120
Raju, N. B. 177
Ramsdale, M. 104
Rangel, P. 45
Raponi, M. 38
Rasmussen, C. 201
Rasmussen, J. P. 206
Renault, S. 119
Rensing, L. 123
Rodriguez, N. A. 12
Roenneberg, T. 49, 68
Roger, A. J. 81
Rossi, A. 131, 132
Rudd, S. 117
Ruiz, T. 120
Russo, V. E. A. 95, 96, 97
Ryder, S. P. 84
Sachs, M. S. 52, 60
Sahakyan, G. G. 6
Saupe, S. J. 64
Scarborough, G. A. 158
Schliwa, M. 86, 179
Schmidhauser, T. J. 5
Schulte, U. 50
Schwerdtfeger, C. 109
Selitrennikoff, C. P. 119
Selker, E. U. 55, 56, 75, 187
Shabala, S. 108
Shi, H. F. 191
Shurubor, E. I. 82
Slatkin, M. 126
Slewa, I. 167
Smoljaninov, V. V. 145
Sokolov, A. V. 62
Spudich, E. N. 21
Spudich, J. L. 21
Stam, J. G. 169
Strobel, S. A. 84
Stryker, J. M. 122
Su, W. 79
Sultana, S. 3
SundarRaj, S. 3
Swanson, J. 75
Tan, Y. 49
Tarrio, R. 161
Tassin, M. S. 105
Taylor, J. W. 40
Tchorzewski, M. 98
Techel, D. 123
Terenzi, H. F. 39
Thedei, G. 131, 132
Thomas, T. 109
Thompson, A. 85, 116
Tian, B. 194
Tivol, W. F. 192
Tomita, F. 172
Truscott, K. N. 155
Tschudi, C. 191
Turgeon, B. G. 207
Vaz, F. M. 185
Videira, A. 50
Vovelle, F. 105
Wanders, R. J. 185
Wang, J. 79, 94
Wang, L. 76
Wang, M. B. 54
Wang, Z. 60, 168
Waterhouse, P. 54
Weil, B. 117
Westermann, B. 58, 150
Wiedemann, N. 155
Williams, R. L. 56
Wilson, T. J. 103
Wittig, M. 83
Woehlke, G. 86, 179
Wu, C. 52
Wu, Y. 48
Xie, X. 109
Xu, J. R. 211
Yamagata, Y. 138
Yang, Y. H. 27, 76
Yeadon, P. J. 154
Yekta, S. 182
Yong, P. 137
Zamore, P. D. 80
Zheng, Z. 79
Zhi, G. 204
Zhou, Y. 100
Zickler, D. 177
Zvyagilskaya, R. A. 82
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